Figure 2
Phylogenomic tree based on Pseudomonas genomes included the strain EP178T. The evolutionary distances were calculated from the ubiquitous and informative 400 proteins. Orthologues from these proteins were detected with Diamond. The multiple alignment was inferred using MAFFT and the construction of the tree was carried out with FastTree. The genome from Cellvibrio japonicum Ueda107T was used as outgroup.
