Table 2 The list of proteins from laser-microdissected amyloid samples on proteomic analysis.

From: Identification of apolipoprotein E-derived amyloid within cholesterol granulomas of leopard geckos (Eublepharis macularius)

Accession

Protein description

Animal number

4

5

6

7

8

Peptides

emPAI

Peptides

emPAI

Peptides

emPAI

Peptides

emPAI

Peptides

emPAI

XP_054855853.1

Apolipoprotein E

41

4.48

21

1.23

85

17.23

60

4.48

62

8.05

XP_054849677.1

Serum amyloid P-component

–

–

–

–

–

–

–

–

7

0.45

XP_054848254.1

Collagen alpha-1(I) chain

2

0.05

–

–

5

0.07

–

–

1

0.02

XP_054859234.1

Keratin, type II cytoskeletal 5

2

0.06

2

0.06

–

–

–

–

–

–

XP_054826898.1

Protein Daple isoform X1

5

0.01

5

0.01

4

0.01

4

0.01

5

0.01

XP_054848662.1

Histone H4

–

–

–

–

–

–

–

–

1

0.3

XP_054858047.1

Vitronectin

–

–

–

–

–

–

3

0.13

–

–

XP_054844790.1

Histone H2B 7

–

–

–

–

1

0.22

–

–

1

0.22

  1. Proteins were detected in at least two cases of the five animals, and amyloid signature and precursor proteins are listed. Trypsin, used for digestion, was excluded. The number of peptides indicates the count of peptides derived from each protein detected by proteomic analysis.
  2. emPAI exponentially modified protein abundance index, – not detected.