Table 1 Novel species candidates isolated from the healthy human gut microbiota in a streamlined culturomics approach.
From: A streamlined culturomics case study for the human gut microbiota research
Name of species and strain | Novelty | GenBank accession no. | Culture collection no. | Morphological characteristics | |
|---|---|---|---|---|---|
16S rRNA | Draft genome | ||||
Blautia sp. HCN-1074 | sp. nov | OP753744 | SRR28033822 | KCCM 90502, KCTC 25612, JCM 36214 | Coccobacillus-shaped (0.5–0.7 × 0.8–1.7 μm); colonies were creamy white, flat, and circular, ranging in diameter from 0.5 to 2.5 mm |
Blautia sp. HCN-20427 | sp. nov | OP753574 | SRR28033835 | KCCM 90504, KCTC 25602, JCM 36141 | Spherical-shaped (0.8–1.2 μm in diameter); colonies were creamy white, flat, and circular ranging in diameter from 0.5 mm to 1 mm |
Erysipelotrichaceae sp. HCN-30851 | gen. nov., sp. nov | OP753719 | SRR28033834 | KCTC 25604, JCM 36071 | Short rods (0.8–1.3 × 0.3–0.4 μm); colonies were creamy white, slight convex, and circular ranging in diameter from 0.5 mm to 2 mm |
Enterocloster sp. HCN-30185 | sp. nov | OP753730 | SRR28033826 | KCTC 25608, JCM 36192 | Long rods (1.4–5.2 × 0.4–0.7 μm); colonies were translucent, flat, and round, ranging in diameter from 0.5 mm to 2 mm |
Oscillospiraceae sp. HCN-4035 | gen. nov., sp. nov | OP753822 | SRR28033832 | KCCM 90509, KCTC 25618, JCM 36193 | Long, thread-like rod-shaped (1.5–21.1 × 0.4–0.6 μm); colonies had punctiform morphology |
Peptoniphilus sp. HCN-40583 | sp. nov | OP753729 | SRR28033827 | KCCM 90508, KCTC 25607, JCM 36142 | Spherical-shaped (0.5–1.2 μm in diameter); colonies were creamy white, slightly convex, and small round, less than 0.5 mm in diameter |
Phocaeicola sp. HCN-40430 | sp. nov | OP753734 | SRR28033825 | KCTC 25610, JCM 36018 | Rod-shaped (1.2–3.0 × 0.8–0.9 μm); colonies were creamy white, convex, and moist circular ranging in a diameter from 1 to 3 mm |
Butyricimonas sp. HCN-50115 | sp. nov | OP753735 | SRR28033823 | KCCM 90510, KCTC 25611, JCM 36246 | Oval or slightly curved rod-shaped (0.6–0.8 × 0.8–2.0 μm); colonies had punctiform morphology |
Streptococcus sp. HCA-5024 | sp. nov | OP753736 | SRR28033824 | KCTC 43475, JCM 36001 | Streptococcal appearance with the cocci (0.6–1.7 μm in diameter); colonies were creamy white and round, less than 0.5 mm in diameter and occurred singly |
Clostridium sp. HCN-6482 | sp. nov | OP763639 | SRR28033830 | KCTC 25620, JCM 36194 | Short-rod shaped (0.4–0.5 × 1.1–3.5 μm); colonies were translucent, moist, flat, and circular colonies less than 0.5 mm in diameter |
Phocaeicola sp. HCN-6420 | sp. nov | OP762691 | SRR28033829 | KCTC 25621, JCM 36017 | Coccobacillus-shaped (0.5–0.8 × 0.8–2.0 μm); colonies were creamy white, moist, convex, and circular colonies, ranging from 1 to 2 mm in diameter |
Prevotella sp. HCN-7019 | sp. nov | OP811536 | SRR28033821 | KCTC 25615, JCM 36069 | Coccobacillus-shaped (0.4–0.5 × 0.6–0.8 μm); colonies were creamy white, moist, convex, and circular, less than 1 mm |
