Table 6 Average compression ratio (%), average compression time per sample (sec/GB) and average decompression time per sample (sec/GB) using gzip, SPRING, or GeneSqueeze algorithms.
From: Lossless and reference-free compression of FASTQ/A files using GeneSqueeze
Gzip | SPRING | GeneSqueeze | |
|---|---|---|---|
Average compression ratio (%) | 21.20% | 7.61% | 7.70% |
Average compression time (sec/GB) | 44.4 | 36.7 | 550.3 |
Average Decompression time (sec/GB) | 5.2 | 5.6 | 606.5 |
