Table 4 Detailed result of model refinement by the GalaxyRefine server.

From: Immunoinformatics design of a multi-epitope vaccine for Chlamydia trachomatis major outer membrane proteins

Model

GDT-HA

RMSD

MolProbity

Clash score

Poor rotamers

Rama favoured

Initial

1.0000

0.000

3.108

7.7

15.4

76.0

MODEL 1

0.9391

0.445

2.163

12.2

0.3

89.4

MODEL 2

0.9456

0.431

2.172

12.7

0.6

89.6

MODEL 3

0.9403

0.439

2.162

12.4

0.6

89.6

MODEL 4

0.9297

0.455

2.159

12.7

0.6

90.1

MODEL 5

0.9344

0.456

2.113

11.3

0.6

90.1

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