Table 4 Gene sets enriched in phenotype low.

From: TMEM101 expression and its impact on immune cell infiltration and prognosis in hepatocellular carcinoma

MSigDB collection

Gene set name

NES

NOM p-val

FDR q-val

c5.all.v2023.2.Hs.symbols.gmt

KEGG_FATTY_ACID_METABOLISM

-3.87

0.000

0.000

KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION

-3.42

0.000

0.000

KEGG_RETINOL_METABOLISM

-3.23

0.000

0.000

KEGG_TRYPTOPHAN_METABOLISM

-3.21

0.000

0.000

KEGG_ARGININE_AND_PROLINE_METABOLISM

-3.01

0.000

0.000

KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM

-2.86

0.000

0.000

KEGG_LINOLEIC_ACID_METABOLISM

-2.50

0.000

0.000

KEGG_PPAR_SIGNALING_PATHWAY

-2.47

0.000

0.000

KEGG_CITRATE_CYCLE_TCA_CYCLE

-2.47

0.000

0.000

 

KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM

-2.31

0.000

0.000

  1. NES: normalized enrichment score; NOM: nominal; FDR: false discovery rate. Gene sets with NOM p-val < 0.05 and FDR q-val < 0.05 are considered as significant.