Table 3 mRNA network modules for seminoma, with preservation state shows mRNA seminoma vs. non-seminoma analysis results.
From: Networks of pre-diagnostic circulating RNA in testicular germ cell tumour
Module | Eigengenes | Top KEGG 2021 Pathway for Top 10 HUB genes | Top KEGG 2021 Pathway for All Genes in Module | Preservation state | ||
|---|---|---|---|---|---|---|
E1 | E2 | E3 | ||||
Black | USP14 | GHRHR | CTNND1 | - | - | Preserved (21) |
Blue | UBE2W | OAS3 | TNFAIP2 | - | - | Preserved (114) |
Brown | CFAP100 | TTC7B | NRCAM | - | - | Preserved (181) |
Cyan | RP1-27O5.3 | PSEN1 | CERKL | - | - | Preserved (26) |
Darkgreen | NLRP11 | DNAJB14 | ADCY7 | - | - | Preserved (12) |
Darkred | HEPH | HMG20B | ZNF565 | - | - | Preserved (6) |
Green | DPPA2 | PUDP | TMPRSS6 | - | Ascorbate and aldarate metabolism | Preserved (44) |
Greenyellow | GLIPR1 | TBX18 | ITPKB | - | - | Preserved (40) |
Grey60 | FAM151B | EEA1 | RAD23B | - | - | Preserved (32) |
Lightcyan | FASN | SCN2B | C1orf198 | - | - | Preserved (8) |
Lightgreen | PPP1R13B | UBXN8 | ZNF280C | - | - | New |
Lightyellow | UVSSA | KLHL21 | FIGNL1 | - | - | New |
Magenta | SCN5A | CLUH | ST8SIA1 | - | - | Preserved (115) |
Midnightblue | ZC4H2 | ATP1B1 | GRID2 | - | - | Preserved (17) |
Pink | TBX5 | HSPA9 | EIF4G1 | - | Shigellosis | Preserved (68) |
Purple | RP11-729L2.2 | SMAD4 | PNPLA7 | Viral myocarditis | - | Preserved (11) |
Red | BEST3 | SLC16A2 | CAMK1D | - | T cell receptor signalling pathway | Preserved (151) |
Royalblue | RAB8B | ZNF143 | POM121C | - | - | Preserved (10) |
Salmon | SHC3 | UGGT1 | IARS2 | - | - | Preserved (9) |
Tan | PDE6D | CENPN | LARP4 | - | - | Preserved (20) |
Turquoise | CHRNA7 | NECTIN3 | PPP1R9A | - | - | Preserved (549) |
Yellow | PANK3 | PANK2 | COPZ1 | Pantothenate and CoA biosynthesis | Hippo signalling pathway | Preserved (173) |
