Table 4 Codon usage bias parameter information for CDS sequence of P. kingianum MtDNA.

From: The characterisation of the complete mitochondrial genome of Polygonatum Kingianum reveals recombination mediated by repeats associated with DNA replication

Genes

codon No.

GC1

GC2

GC3

GC_all

ENC

GC3 s

atp1

510

57.45

42.75

35.1

45.1

51.86

35.4

atp4

196

44.9

42.86

38.27

42.01

59.85

38.8

atp6

307

49.19

37.13

36.16

40.83

50.81

36.3

atp8

155

38.06

37.42

43.23

39.57

50.23

44.1

atp9

75

50.67

49.33

38.67

46.22

39.61

38.7

ccmB

207

45.89

43.48

36.23

41.87

49.82

36.4

ccmC

249

46.59

48.19

36.95

43.91

50.59

37.1

ccmFc

451

49

44.12

42.79

45.31

55.17

43.1

ccmFn

596

50.84

50

41.95

47.6

54.8

42

cob

394

50.51

41.62

34.26

42.13

53.54

34.1

cox1

528

47.73

42.8

36.74

42.42

52.92

36.9

cox2

261

52.11

39.08

32.95

41.38

47.01

32.7

cox3

266

52.63

45.11

34.96

44.24

52.16

34.7

matR

657

54.64

45.81

56.62

52.36

53.52

56.8

mttB

116

44.83

40.52

46.55

43.97

51.25

45.5

nad1

326

53.99

43.25

30.98

42.74

51.53

31.2

nad2

489

42.74

44.38

35.38

40.83

50.92

35.2

nad3

119

43.7

47.9

37.82

43.14

45.42

37.9

nad4

496

46.37

43.75

36.29

42.14

53.81

37

nad4L

101

39.6

40.59

26.73

35.64

40.04

27.3

nad5

671

44.11

44.71

35.92

41.58

51.19

36.1

nad6

260

47.31

43.08

45.38

45.26

57.91

45.2

nad7

417

55.4

46.28

32.37

44.68

47.02

32.5

nad9

191

51.83

42.41

33.51

42.58

52.99

34.2

rpl16

137

48.91

58.39

29.93

45.74

53.86

30.7

rpl5

189

48.15

38.1

43.39

43.21

55.85

44.3

rps1

203

44.83

42.36

40.89

42.69

47.92

40.6

rps10

128

42.19

38.28

39.84

40.1

59.32

40.3

rps12

126

55.56

48.41

31.75

45.24

54.36

33.6

rps13

117

50.43

41.03

28.21

39.89

38.9

27.4

rps14

101

44.55

46.53

38.61

43.23

59.18

38.5

rps19

91

38.46

46.15

32.97

39.19

42.91

34.1

rps2

222

42.34

38.74

35.59

38.89

53.96

35.6

rps3

549

45.36

40.8

44.81

43.66

58.09

45

rps4

345

41.45

41.74

37.1

40.1

54.2

37.9