Table 1 Number of reads mapped to the S. venezuelensis genome and unique sRNA sequences expressed at each lifecycle stage.

From: Small non-coding RNAs have predicted roles in reproductive biology and transposable element regulation in the parasitic worm Strongyloides venezuelensis

Lifecycle stage

5’pN-enriched library

RppH-treated library

 

Raw reads

Unique sRNA sequences

Unique RPM

Raw reads

Unique sRNA sequences

Unique RPM

Parasitic ♀

936,322

23,462

25,058

1,467,016

134,366

91,591

Free-living ♀

1,899,824

57,419

30,223

4,726,900

563,189

119,146

Free-living iL3

1,018,261

15,928

15,642

510,244

13,356

26,176

activated iL3

1,586,323

56,594

35,676

1,209,485

58,849

48,656

eggs

1,624,578

37,310

22,966

1,219,893

42,851

35,127

  1. The values represent the mean number of reads. Unique reads were included only if they were expressed in at least two replicates.
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