Fig. 1 | Scientific Reports

Fig. 1

From: Zoonotic potential of methicillin-resistant Staphylococcus aureus isolated from pets and their owners in Bangladesh

Fig. 1

Phylogenetic relatedness, phenotypic and genotypic characteristics of MRSA isolated from pet and their owners in Bangladesh. The tree was constructed from the core-genome alignment of the twelve (12) MRSA sequences from this study. Core genome alignment was performed using Rorary Pangenome pipeline. The maximum likelihood tree was constructed from the core genome alignment file using RAxML Next Generation V1.2.2. The tree is showing the isolated ID, sampling information, genotypic and phenotypic characteristics. ST, spa, and SCCmec types were determined using PubMLST server, spaTyper, and SccmecFinder 1.2, respectively. Antimicrobial resistance (AMR) phenotypes: CIP, ciprofloxacin; CE, cephradine; Fox, cefoxitin; P, penicillin; TE, tetracycline. Antimicrobial resistance genes were identified using Comprehensive Antibiotic Resistance Database (CARD). Abbreviations: AH, apparently healthy; NS, nasal swab; PS, pus swab; UT, untypable; WS, wound swab.

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