Table 4 GSEA enrichment analysis.

From: Oxidative stress gene expression in ulcerative colitis: implications for colon cancer biomarker discovery

ID

Enrichment score

NES

p.adjust

qvalue

GSEA enrichment analysis results of TCGA-COADREAD dataset

 WP_GLUCURONIDATION

− 0.74493

− 1.80676

0.04803

0.043893

 KEGG_INTESTINAL_IMMUNE_NETWORK_FOR_IGA_PRODUCTION

− 0.68942

− 1.78536

0.04803

0.043893

 WP_PEPTIDE_GPCRS

− 0.58377

− 1.57572

0.04803

0.043893

 REACTOME_BIOLOGICAL_OXIDATIONS

− 0.52996

− 1.49067

0.04803

0.043893

 REACTOME_ADORA2B_MEDIATED_ANTI_INFLAMMATORY_CYTOKINES_PRODUCTION

− 0.52039

− 1.43622

0.04803

0.043893

 REACTOME_GPCR_LIGAND_BINDING

− 0.48201

− 1.38481

0.04803

0.043893

GSEA enrichment analysis results of GSE4183 dataset

 WP_IL18_SIGNALING_PATHWAY

0.574568

2.353922

0.019147

0.01387

 WP_INFLAMMATORY_BOWEL_DISEASE_SIGNALING

0.693156

2.161687

0.019147

0.01387

 WP_IL4_SIGNALING_PATHWAY

0.633035

2.063739

0.019147

0.01387

 WP_CYTOKINES_AND_INFLAMMATORY_RESPONSE

0.722968

2.012929

0.019147

0.01387

 WP_IL6_SIGNALING_PATHWAY

0.602256

1.878203

0.027668

0.020043

 BIOCARTA_IL12_PATHWAY

0.718206

1.883277

0.035652

0.025827

  1. TCGA the cancer genome atlas, GSEA gene set enrichment analysis, COADREAD colorectal carcinoma.
  2. GSEA gene set enrichment analysis.
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