Table 2 QUBO results with no external protein present. The table shows the fraction of states corresponding to feasible conformations and the lowest MJ interaction across all 100 HPO jobs, with 10 shots per job, for each problem instance.

From: Quadratic unconstrained binary optimization and constraint programming approaches for lattice-based cyclic peptide docking

PDB ID

Feasible fraction

Best MJ interactions

3WNE

1.0

\(-1.87\)

5LSO

1.0

\(-5.97\)

3AV9

0.55

\(-6.64\)

3AVI

0.61

\(-8.54\)

3AVN

0.55

\(-6.88\)

2F58

0.08

\(-6.02\)

Back to article page