Table 1 Types and frequencies of the alterations at the 20 STR loci in HCC.
From: Evaluation of genetic instability of short tandem repeats in hepatocellular carcinoma
Locus | Types of alterations (n, %) | Total alterations (n, %) | |||
|---|---|---|---|---|---|
pLOH | LOH | Aadd | Anew | ||
D2S1338 | 7 (6.93%) | 0 | 0 | 0 | 7 (6.93%) |
TPOX | 3 (2.97%) | 0 | 2 (1.98%) | 0 | 5 (4.95%) |
D2S441 | 7 (6.93%) | 0 | 0 | 0 | 7 (6.93%) |
D3S1358 | 7 (6.93%) | 1 (0.99%) | 0 | 0 | 8 (7.92%) |
FGA | 37 (36.63%) | 4 (3.96%) | 5 (4.95%) | 2 (1.98%) | 48 (47.52%) |
D5S818 | 11 (10.89%) | 3 (2.97%) | 1 (0.99) | 0 | 15 (14.85%) |
CSF1PO | 10 (9.90%) | 1 (0.99%) | 0 | 0 | 11 (10.89%) |
D6S1043 | 20 (19.80%) | 2 (1.98%) | 0 | 0 | 22 (21.78%) |
D7S820 | 8 (7.92%) | 0 | 0 | 0 | 8 (7.92%) |
D8S1179 | 20 (19.80%) | 1 (0.99%) | 2 (1.98%) | 0 | 23 (22.77%) |
TH01 | 9 (8.91%) | 1 (0.99%) | 0 | 0 | 10 (9.90%) |
D12S391 | 15 (14.85%) | 2 (1.98%) | 3 (2.97%) | 1 (0.99%) | 21 (20.79%) |
vWA | 13 (12.87%) | 1 (0.99%) | 1 (0.99%) | 0 | 15 (14.85%) |
D13S317 | 20 (19.80%) | 4 (3.96%) | 0 | 0 | 24 (23.76% ) |
Penta E | 11 (10.89%) | 2 (1.98%) | 0 | 1 (0.99%) | 14 (13.86%) |
D16S539 | 38 (37.62%) | 5 (4.95%) | 0 | 0 | 43 (42.57%) |
D18S51 | 13 (12.87%) | 4 (3.96%) | 1 (0.99%) | 0 | 18 (17.82%) |
D19S433 | 5 (4.95%) | 1 (0.99%) | 0 | 0 | 6 (5.94%) |
Penta D | 15 (14.85%) | 2 (1.98%) | 0 | 0 | 17 (16.83%) |
D21S11 | 12 (11.88%) | 3 (2.97%) | 1 (0.99%) | 0 | 16 (15.84%) |
Average | 281 (13.91%) | 37 (1.83%) | 16 (0.79%) | 4 (0.20%) | 338 (16.73%) |
