Table 3 Codon and relative synonymous codon usage (RSCU) of 13 PCGs in the An. hyrcanus and An. messeae mitochondrial genomes.

From: Comparative mitochondrial genome and phylogenetic analysis of malaria mosquitoes Anopheles hyrcanus and Anopheles messeae

Amino Acid

Codon

Count

RSCU

Amino Acid

Codon

Count

RSCU

Phe

UUU

378/382

1.73/1.73

Tyr

UAU

198/196

1.71/1.71

 

UUC

59/59

0.27/0.27

 

UAC

34/33

0.29/0.29

Leu

UUA

355/350

4.12/4.11

His

CAU

54/46

1.69/1.39

 

UUG

62/63

0.72/0.74

 

CAC

10/20

0.31/0.61

 

CUU

45/52

0.52/0.61

Gln

CAA

55/64

1.45/1.54

 

CUC

15/11

0.17/0.13

 

CAG

21/19

0.55/0.46

 

CUA

31/27

0.36/0.32

Asn

AAU

214/195

1.65/1.59

 

CUG

9/8

0.10/0.09

 

AAC

46/51

0.35/0.41

Ile

AUU

303/308

1.71/1.79

Lys

AAA

95/94

1.44/1.41

 

AUC

38/28

0.21/0.16

 

AAG

37/39

0.56/0.59

Met

AUA

190/181

1.07/1.05

Asp

GAU

53/51

1.63/1.59

 

AUG

36/39

1.00/1.00

 

GAC

12/13

0.37/0.41

Val

GUU

64/64

1.95/2.10

Glu

GAA

49/52

1.61/1.58

 

GUC

7/6

0.21/0.20

 

GAG

12/14

0.39/0.42

 

GUA

56/47

1.71/1.54

Cys

UGU

51/50

1.34/1.39

 

GUG

4/5

0.12/0.16

 

UGC

25/22

0.66/0.61

Ser

UCU

63/76

1.35/1.58

Trp

UGA

79/81

1.14/1.10

 

UCC

30/29

0.64/0.60

 

UGG

31/23

1.00/1.00

 

UCA

89/72

1.91/1.49

Arg

CGU

5/3

0.23/0.15

 

UCG

17/15

0.36/0.31

 

CGC

1/2

0.05/0.10

Pro

CCU

38/44

1.97/1.89

 

CGA

24/23

1.13/1.15

 

CCC

13/16

0.68/0.69

 

CGG

3/1

0.14/0.05

 

CCA

24/26

1.25/1.12

Ser

AGU

62/70

1.33/1.45

 

CCG

2/7

0.10/0.30

 

AGC

19/27

0.41/0.56

Thr

ACU

59/67

1.50/1.71

 

AGA

60/51

2.81/2.55

 

ACC

26/25

0.66/0.64

 

AGG

35/40

1.64/2.00

 

ACA

62/56

1.58/1.43

Gly

GGU

27/33

0.78/0.94

 

ACG

10/9

0.25/0.23

 

GGC

6/4

0.17/0.11

Ala

GCU

57/66

2.21/2.42

 

GGA

81/82

2.33/2.33

 

GCC

9/7

0.35/0.26

 

GGG

25/22

0.72/0.62

 

GCA

32/34

1.24/1.25

TER

UAA

99/99

1.35/1.35

 

GCG

5/2

0.19/0.07

 

UAG

40/40

0.55/0.55

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