Table 1 Subtype and characteristics of healthy and breast cancer cell lines used.

From: RNA-seq analysis of wild-type and mutated TBPL1 gene in breast cancer cells lines through CRISPR/Cas9 approach reveals novel molecular signatures

Cell line

Subtype

Molecular markers

Incidence

Description

MCF-12F

Normal basal-epithelial

Does not express receptors like ER

Used as a healthy model in breast cancer studies

Non-tumorigenic* epithelial cell line

T47D & MCF-7

luminal A

ER + and/or PR + , HER2 − and low Ki67

The most common subtype (50–60% of all cases)

Exhibit robust cell-to-cell junctions(36)

The relapse rate is the lowest in comparison to other types

The recurrence is mainly in the boneGood prognosis for the patient

SK-BR-3

HER2-enriched

HER2/Neu receptor overexpression ER + , PR − and any Ki-67

20–30% of all cases of breast cancer

Aggressive biological and clinical behavior

HCC-1937

Basal-like B

ER − , PR − and HER2 − 

TNBC cell line with stage IIB grade 3

Derived from primery ductal carcinoma

Good prognosis for the patient

MDA-MB-231

Basal-like

ER − , PR − , HER2 − , CK5/6 + , and/or EGFR + 

80% of basal-like subtype is triple-negative

15–20% of all cases of breast cancer

Aggressive clinical behavior

High rate of metastasis to the brain and lung

Poor patient prognosis(10)

  1. *Information obtained from the American Type Culture Collection (ATCC) web site.