Table 3 Molecular Docking scores and interaction profiles of 12 synthesized thiophene–isoquinoline derivatives and their precursor compound, 1a (a thiophene-based half ester), were evaluated against acetylcholinesterase (AChE; PDB ID: 6ARY). Results were compared with the reference insecticide Chlorpyrifos and the redocked co-crystallized ligand BT7.
Code | S | RMSD | Residues | Interaction | Distance | E (kcal/mol) |
|---|---|---|---|---|---|---|
1a | −6.72 | 1.38 | SER 280 (B) | H-acceptor | 3.12 | −1.9 |
HIS 600 (B) | pi-H | 4.01 | −0.5 | |||
2 | −6.56 | 0.82 | GLY 279 (B) | H-acceptor | 2.91 | −1.4 |
SER 280 (B) | H-acceptor | 3.04 | −4.5 | |||
HIS 600 (B) | Ionic | 2.93 | −5 | |||
HIS 600 (B) | pi-H | 4.06 | −0.5 | |||
3 | −6.10 | 1.93 | SER 360 (B) | H-donor | 3.94 | −1 |
5a | −7.33 | 1.05 | SER 280 (B) | H-acceptor | 2.87 | −0.7 |
5b | −7.19 | 1.24 | GLU 359 (B) | H-donor | 3.2 | −0.6 |
SER 280 (B) | H-acceptor | 2.91 | −1 | |||
TRP 245 (B) | H-pi | 3.69 | −0.5 | |||
5c | −7.60 | 1.18 | GLU 359 (B) | H-donor | 4.04 | −0.6 |
VAL 232 (B) | H-acceptor | 3.34 | −0.6 | |||
VAL 232 (B) | H-acceptor | 3.12 | −0.5 | |||
GLY 279 (B) | pi-H | 4.34 | −0.5 | |||
TYR 489 (B) | pi-H | 4.7 | −0.5 | |||
5d | −7.44 | 1.27 | GLU 359 (B) | H-donor | 4.05 | −0.6 |
VAL 232 (B) | H-acceptor | 3.32 | −1.2 | |||
ASN 246 (B) | H-acceptor | 3.57 | −0.6 | |||
VAL 232 (B) | H-acceptor | 3.1 | −0.9 | |||
5e | −7.12 | 1.54 | PHE 490 (B) | H-donor | 2.94 | −0.8 |
SER 280 (B) | pi-H | 3.9 | −0.7 | |||
PHE 490 (B) | pi-H | 4.2 | −0.6 | |||
5f | −7.43 | 1.83 | GLU 359 (B) | H-donor | 3.47 | −0.6 |
SER 280 (B) | H-acceptor | 3.19 | −0.7 | |||
6 | −6.12 | 1.31 | GLU 359 (B) | H-donor | 3.3 | −0.6 |
GLY 279 (B) | pi-H | 4.12 | −0.6 | |||
7 | −7.37 | 1.03 | GLY 279 (B) | H-acceptor | 3.1 | −1.3 |
SER 280 (B) | H-acceptor | 2.88 | −1.8 | |||
8 | −6.31 | 0.62 | GLU 359 (B) | H-donor | 2.9 | −0.9 |
GLY 279 (B) | pi-H | 3.69 | −0.6 | |||
GLY 279 (B) | pi-H | 4.48 | −0.5 | |||
9 | −8.47 | 1.47 | GLY 279 (B) | pi-H | 4.35 | −1 |
GLY 601 (B) | pi-H | 4.71 | −0.6 | |||
Chlorpyrifos | −6.62 | 1.79 | ILE 231 (B) | H-donor | 3.50 | −0.6 |
GLU 359 (B) | H-donor | 3.31 | −0.5 | |||
Redocked Co-Crystallized ligand | −5.34 | 0.78 | SER 280 (B) | H-acceptor | 2.77 | −0.6 |
TYR 282 (B) | H-acceptor | 2.96 | −1.3 |