Table 1 Genomic datasets used in this study. “A.” stands for Actinoplanes.
Micromonospora Species | Genbank assembly | Assembly level | Genome size (Mb) | DNA G + C content (%) | Genes | Protein coding | Completeness (%) | Contamination rates (%) |
|---|---|---|---|---|---|---|---|---|
M.terminaliae DSM 101760T | GCA_009671205.1 | complete (2) | 6.7 | 73.5 | 6311 | 6096 | 96.78 | 7.14 |
M.robiginosa DSM 111791T | GCA_013694245.2 | complete (1) | 6.7 | 73.5 | 6043 | 5859 | 96.00 | 2.06 |
M.kangleipakensis JCM 17696T | GCA_004217615.1 | Contig (1) | 7.3 | 72.5 | 6971 | 6550 | 95.67 | 8.45 |
M.inositola JCM 6239T | GCA_900090285.1 | Chromosome (1) | 6.7 | 72.0 | 6482 | 6125 | 95.93 | 5.25 |
M.veneta CAP 181T | GCA_016598485.1 | Contig (137) | 6.8 | 72.5 | 6583 | 6358 | 95.00 | 5.10 |
M.coerulea JCM 3175T | GCA_039541735.1 | Scaffold (128) | 6.6 | 72.5 | 6397 | 6266 | 96.01 | 6.07 |
M.chalcea DSM 43026T | GCA_002926165.1 | Contig (186) | 7.0 | 73.0 | 6284 | 6091 | 96.80 | 4.02 |
M.salmantinae PSH03T | GCA_022230905.1 | Contig (45) | 7.0 | 71.0 | 6464 | 6313 | 94.74 | 3.63 |
M.saelicesensis JCM 16032T | GCA_900091575.1 | Scaffold (11) | 7.1 | 71.0 | 6648 | 6490 | 98.34 | 3.87 |
M.vinacea DSM 101695T | GCA_015751785.1 | Contig (1) | 7.3 | 71.0 | 6862 | 6796 | 98.71 | 2.68 |
M.arida LB32T | GCA_003857035.1 | Contig (345) | 7.1 | 71.0 | 6739 | 6489 | 98.34 | 3.97 |
M.foliorum PSH25T | GCA_022229015.1 | Contig (586) | 6.8 | 71.0 | 6700 | 6514 | 92.76 | 2.63 |
M.endolithica JCM 12677T | GCA_003626595.1 | Scaffold (40) | 7.0 | 72.5 | 6474 | 6180 | 96.41 | 4.12 |
M.sagamiensis JCM 3310T | GCA_014680085.1 | complete (1) | 6.9 | 72.5 | 5987 | 5896 | 93.99 | 6.63 |
M.inyonensis JCM 3188T | GCA_900091415.1 | Contig (4) | 6.9 | 72.0 | 6253 | 5865 | 92.79 | 6.42 |
M.phytophila DSM 105363T | GCA_023656545.1 | Scaffold (628) | 6.6 | 72.0 | 6347 | 6111 | 87.99 | 5.09 |
M.echinospora JCM 3073T | GCA_900091495.1 | Chromosome (1) | 7.8 | 72.5 | 6690 | 6449 | 94.99 | 10.41 |
A. aksuensis LMG 32622T | GCA_024137025.1 | Contig (16) | 10.0 | 70.5 | 9345 | 9120 | 92.90 | 6.72 |
