Table 4 Molecular Docking scores of genotype II (LaSota) and Sub-genotype XIV.2 peptides with chicken MHC class I (BF2*2101).
Strain/Control | Epitope | Receptor | Affinity (kcal/mol) |
|---|---|---|---|
Sub-genotype XIV.2 | RRKRFVGA | BF2*2101 | −6.3 |
TAFGPQITS | −6.9 | ||
MAKSSYKPR | −5.9 | ||
SVAVSYSLK | −7.9 | ||
Genotype II (LaSota) | RQGRLIGA | −6.7 | |
TVFGPQITS | −7.3 | ||
MAKSSYKGR | −7.5 | ||
NVAVSYSLK | −7.7 | ||
Positive Control | IDWFDGKE | −7.0 | |
RRALREGY | −6.9 |
