Fig. 3

Over-representation analysis (ORA) after network diffusion reveals processes controlled by TGF-β such as endocytosis, mitosis, or extracellular matrix in Bioplanet DB. (A) ORA of DPP in the BBS1KO before network diffusion. (B) ORA of top 100 proteins with the highest RWR score in the BBS1KO after network diffusion. (C) ORA of DPP in the ALMS1KO before network diffusion. (D) ORA of top 100 proteins with the highest RWR score in the ALMS1KO after network diffusion.