Table 1 Summary of strongly differentially expressed genes (adjusted p ≤ 0.05 and absolute log2FC > 1) between the high and control groups across all four muscle tissues – filet, adductor mandibulae (AM), stomach, and heart.
From: Vitamin D modulates gene expression in four major muscle tissues in Atlantic salmon
Upregulated genes | Downregulated genes | ||||||
|---|---|---|---|---|---|---|---|
Muscle | Gene ID | Fold change (log2) | Gene name | Muscle | Gene ID | Fold change (log2) | Gene name |
Filet | EX004487 | 4.4 | AM | EX090080 | − 3.8 | ||
Filet | EX001874 | 4.2 | AM | EX112871 | − 3.1 | zinc finger protein 250-like | |
Filet | EX091598 | 3.8 | upk1a | AM | EX118289 | − 1.6 | |
Filet | EX104459 | 3.7 | AM | EX044965 | − 1.5 | psat1 | |
Filet | EX120674 | 2.4 | Stomach | EX089520 | − 5.1 | protein BUD31 homolog | |
Filet | EX059264 | 2.4 | frrs1 | Heart | EX073978 | − 1.8 | slc24a4b |
AM | EX106621 | 2.9 | Heart | EX073280 | − 1.6 | klf15 | |
AM | EX116233 | 1.7 | Heart | EX007137 | − 1.6 | cox4i2 | |
AM | EX099524 | 1.4 | nfil3-5 | Heart | EX064884 | − 1.5 | chordc1a |
AM | EX005415 | 1.2 | Heart | EX000959 | − 1.5 | gys1 | |
Stomach | EX089520 | 5.1 | Heart | EX069706 | − 1.4 | cp1a1 | |
Heart | EX059264 | 8.1 | frrs1 | Heart | EX042664 | − 1.4 | gys1 |
Heart | EX073472 | 1.9 | si:ch73-206d17.1 | Heart | EX004801 | − 1.3 | lrat |
Heart | EX002465 | 1.5 | emp1 | Heart | EX007690 | − 1.3 | acta1 |
Heart | EX065996 | 1.5 | zgc:73226 | Heart | EX066339 | − 1.3 | slc2a1b |
Heart | EX115603 | 1.5 | tnnI1 | ||||
Heart | EX054208 | 1.3 | ate1 | ||||
Heart | EX088475 | 1.3 | gas2a | ||||
Heart | EX077051 | 1.3 | tulp1b | ||||
Heart | EX064919 | 1.2 | gamt | ||||
Heart | EX057658 | 1.2 | zgc:162297 | ||||
