Table 1 QUAST and BUSCO metrics of RA nuclear genome assembly and comparison with the TCC assembly (Berná et al.25).

From: A divide-and-conquer approach to uncover the genomic structure of the highly virulent RA strain of Trypanosoma cruzi

Metric

RA

TCC

# contigs

1812

1237

Largest contig

881,497

1,305,230

Total length

91,255,624

87,058,484

GC (%)

51.8

51.72

N50

132,984

264,196

L50

158

92

# N’s per 100 Kb

0

0

Complete single copy genes

482

577

Complete duplicated genes

4901

4808

Fragmented genes

0

1

Missing genes

14

11

Completeness

99.7%

99.8%

  1. N50: contig length such that using longer or equal length scaffolds produces half of the bases of the assembly. L50: minimum number of contigs that produce half of the bases of the assembly.
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