Table 2 Feature counts in the RA strain nuclear genome and comparison with the TCC assembly (Berná et al.25).

From: A divide-and-conquer approach to uncover the genomic structure of the highly virulent RA strain of Trypanosoma cruzi

Feature

Count

bp

% occupancy

RA

TCC

RA

TCC

RA

TCC

CDS

19,946

22,540

29,043,078

33,685,254

31.83

38.69

TCP

TCFP

9258

10,514

12,759,492

14,709,776

13.98

16.90

TCHP

7779

9179

10,898,109

13,212,279

11.94

15.18

Multigenic families*

CDS

2909

2847

5,385,477

5,763,199

5.90

6.62

pseudogenes

3988

3539

8,138,950

6,949,981

8.92

7.98

Transposable elements

3452

2946

4,674,055

4,369,633

5.12

5.02

ncRNAs

2,07

1,91

257,423

225,671

0.28

0.26

Total

29,456

30,935

42,113,506

45,230,539

46,15

51,95

  1. *For further details see Table 3. CDS: coding sequence; TCP: trypanosomatid-conserved proteins; TCFP: trypanosomatid-conserved proteins with functional annotation; TCHP: trypanosomatid-conserved hypothetical proteins.
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