Table 2 14 SSRs evaluated in 12 local populations, an experimental selection conducted by CIAM (Var.Exp.Tri4, 9079), and two commercial cultivars (‘Huia’ and ‘California’) of white clover, classified by the two reconstructed populations (RPPs) obtained by Structure software.
SSRs | N. alleles in our study | Fragment size in our Study | Alleles | N. exclusive alleles RPP1 | N. exclusive alleles RPP2 | N. rare alleles (P < 0.05) RPP1 | N. rare alleles (P < 0.05) RPP2 |
|---|---|---|---|---|---|---|---|
GTRS1113 | 13 | 177–210 | 1771,1792,1802,1831,2,186,189,192,1951,2,1981,2021,2042,2071,2102 | 1 | 3 | 6 | 6 |
GTRS173 | 22 | 113–168 | 1131,1191,2,1221,125,1272,1281,130, 1311,1321,2,1331,2,1372,1391,1431, 1451,1461,1501,1531,2,1561,1591,162,1631,1681 | 6 | 0 | 17 | 6 |
GTRS211 | 12 | 95–144 | 952,1102,1131,116,118,122,125,1282, 1311,1341,141,1441,2 | 2 | 1 | 4 | 4 |
GTRS292 | 14 | 152–190 | 1521,2,1631,2,164,166,170,1731,176, 1781,1791,2,1821,2,184,1861,1882,1901,2 | 2 | 0 | 8 | 4 |
GTRS319 | 18 | 164–203 | 1641,171,1731,1751,2,1772,178,1811,1822,1851,2,186,1871,2,1892,190,1942,1961,1981,2,2011,2,2032 | 0 | 3 | 9 | 10 |
GTRS376 | 33 | 234–393 | 2341,2,2811,2831,2911,2931,2941,2, 2961,2,2972,2981,2,2991,3002,3021,2, 303,305,309,3101,312,3142,316, 3191,2,3221,2,3281,3311,335,3401, 3521,3591,3631, 3711,3752,3781,3822,3931 | 11 | 2 | 22 | 12 |
GTRS541 | 10 | 83–119 | 832,862,98,101,102,104,107,110, 1131,1192 | 1 | 2 | 1 | 3 |
GTRS564 | 10 | 101–130 | 1011,2,1041,107,1092,113,115,1181,2, 1211,1271,1301 | 4 | 0 | 6 | 3 |
GTRS679 | 18 | 189–233 | 189,192,1951,2,198,2002,202,205, 2091,210,2111,2,2131,2,2152,2191, 222,2251,2,2281,2,2312,2331,2 | 0 | 1 | 8 | 9 |
GTRS723 | 9 | 246–270 | 2462,2492,252,255,258,261,2642, 2671,2,2701 | 1 | 0 | 2 | 4 |
GTRS749 | 20 | 221–279 | 2211,2271,2,2302,2321,2361,2381,2, 240,2421,2451,249,2511,2,2532,255, 2571,2,2592,2611,2631,2641,2,2671,2, 2791,2 | 5 | 1 | 14 | 10 |
GTRS851 | 34 | 290–404 | 2901,321,3232,326,3291,2,3311,3341, 3362,337,3382,3392,3401,3412,3431,2,3441,3451,3462,3482,3492,350,352, 3542,3552,3562,3572,3582,3602,3611,2, 3641,2,3671,3811,2,3872,3902,4041 | 4 | 8 | 13 | 21 |
RCS0035 | 5 | 147–151 | 1471,2,148,149,150,1511 | 0 | 0 | 2 | 1 |
RCS0685 | 7 | 166–185 | 1661,2,170,1731,2,176,179,182,1852 | 0 | 1 | 2 | 3 |
Total | 225 | 37 | 22 | 114 | 96 |