Table 4 List of differentially expressed genes associated with spermatogenesis, cytoskeleton and cell motility between genotypic and temperature-induced males males. The gene function follows the biological databases Uniprot, KEGG, Zfin and GeneCards. Positive log2 fold change (l2fc) indicates transcripts that were more abundant in genotypic males. Negative log2 fold change indicates transcripts that were more abundant in temperature-induced triploid males. Asterisks indicate significant differences in gene expression level between genotypic and temperature-induced males: * for padj < 0.05, for padj < 0.01, * for padj < 0.001.

From: Differential expression of reproduction and sex-determining genes in the gonads of genotypic and temperature-induced males of gibel carp (Carassius gibelio)

Ensembl ID	Gene name	Gene description in Ensembl	Function	L2fc	padj
ENSCARG00000063488	Actr10	Actin Related Protein 10	Activates dynein	−0.44	*
ENSCARG00000057794	Actr3b	Actin Related Protein 3B	Regulation of actin polymerization	1.60	***
ENSCARG00000044296	Arpc1b	Actin-Related Protein 2/3 Complex Subunit 1B-Like	Actin polymerization	−1.47	***
ENSCARG00000012523	Actr2b	Actin-Related Protein 2-B-Like	Mediates actin polymerization	−0.60	***
ENSCARG00000054971	Apc2	Adenomatous Polyposis Coli Protein 2-Like	Stabilization of the cytoskeleton	1.05	**
ENSCARG00000020833	Baiap2l2a	brain-specific angiogenesis inhibitor 1-associated protein 2-l2a	Cytoskeleton organization	1.02	***
ENSCARG00000005444	Cd9a	Tetraspanin 29	Sperm-egg adhesion	−1.15	***
ENSCARG00000005444	Cd9b	Tetraspanin 29	Sperm-egg adhesion	1.01	**
ENSCARG00000041240	Cfl1	Cofilin 1	Cell division and cytoskeleton	−0.45	**
ENSCARG00000048314	Cfl1l	Cofilin 1 (Non-Muscle), Like	Cell division and cytoskeleton	0.39	*
ENSCARG00000055139	Cfl2	Cofilin 2 (Muscle)	Cell division and cytoskeleton	1.27	***
ENSCARG00000062621	Cfl1l	Cofilin-2-Like	Cell division and cytoskeleton	0.65	*
ENSCARG00000012813	Diaph3	Diaphanous-Related Formin 3	Cytoskeleton organization	−1.36	***
ENSCARG00000033789	Dnahc17	Dynein Axonemal Heavy Chain 17	Molecular motor	−1.03	*
ENSCARG00000016098	Dnai2b	Dynein Intermediate Chain 3, Ciliary-Like	Molecular motor	1.10	***
ENSCARG00000015806	Dnai3	WD repeat domain 63	Cell migration	−0.99	*
ENSCARG00000020846	Dnal4a	Dynein Light Chain 1, Axonemal-Like	Molecular motor	−0.83	*
ENSCARG00000067868	Dnal1	Dynein Light Chain 4, Axonemal	Molecular motor	−1.54	*
ENSCARG00000066325	Dnah5	Dynein, Axonemal, Heavy Chain 5	Molecular motor	−0.88	*
ENSCARG00000015354	Dync1i1	Dynein, Cytoplasmic 1, Intermediate Chain 1	Molecular motor	−0.66	***
ENSCARG00000041117	Fgf14	Fibroblast Growth Factor 14	Mitogenic activities	−0.98	***
ENSCARG00000033052	Fgf14	Fibroblast Growth Factor 14	Mitogenic activities	−0.95	**
ENSCARG00000002073	Fgf24	Fibroblast Growth Factor 18-Like	Mitogenic activities	1.65	***
ENSCARG00000068748	Fgf4	Fibroblast Growth Factor 4	Mitogenic activities	1.11	*
ENSCARG00000010217	Fgf8a	Fibroblast Growth Factor 8-Like	Mitogenic activities	0.71	***
ENSCARG00000031169	Fn1b	Fibronectin-Like	Cell adhesion and migration	2.16	***
ENSCARG00000054160	Gsna	Gelsolin a	Cytoskeleton assembly	−0.69	**
ENSCARG00000045339	Lpar2a	lysophosphatidic acid receptor 2a	Cytoskeleton organization	0.44	**
ENSCARG00000045339	Lpar5	lysophosphatidic acid receptor 5	Cytoskeleton organization	−0.87	*
ENSCARG00000028260	Itga2	Integrin Alpha-2-Like	Cell adhesion	1.59	**
ENSCARG00000058212	Itga11a	Integrin Alpha-11	Cell adhesion	−1.59	***
ENSCARG00000023759	Itga4	Integrin Alpha-4	Cell adhesion	1.64	***
ENSCARG00000056600	Itga6	Integrin Alpha-6	Cell adhesion	1.46	***
ENSCARG00000000507	Itga6b	Integrin Alpha-6b	Cell adhesion	1.34	***
ENSCARG00000019599	Itga8	Integrin Alpha-8	Cell adhesion	1.57	***
ENSCARG00000053400	Itga8	Integrin Alpha-8	Cell adhesion	−1.06	***
ENSCARG00000052085	Itgm	Integrin Alpha-M	Cell adhesion	−1.17	***
ENSCARG00000044418	Itga10	Integrin Alpha-10	Cell adhesion	−1.64	**
ENSCARG00000049815	Izumo	Izumo Sperm-Specific Protein	Sperm-egg recognition	2.74	*
ENSCARG00000049229	Kif23	Kinesin Family Member 23	Molecular motor	−0.89	**
ENSCARG00000057752	Kif26aa	Kinesin Family Member 26Aa	Molecular motor	−1.99	***
ENSCARG00000043633	Kif26aa	Kinesin Family Member 26Aa	Molecular motor	−3.29	***
ENSCARG00000032249	Kif26ab	Kinesin Family Member 26Ab	Molecular motor	−1.42	***
ENSCARG00000010175	Klc3	Kinesin Light Chain 3	Molecular motor	0.70	***
ENSCARG00000012280	Kif1ab	Kinesin-1 Heavy Chain-Like	Molecular motor	1.07	*
ENSCARG00000025626	Kif11	Kinesin-Like Protein KIF11	Molecular motor	−0.77	*
ENSCARG00000024504	Kif16ba	Kinesin-Like Protein KIF16B	Molecular motor	0.31	*
ENSCARG00000067451	Kif1ab	Kinesin-Like Protein KIF1A	Molecular motor	1.03	*
ENSCARG00000008396	Kif5ba	Kinesin-Like Protein KIF1A	Molecular motor	−1.01	***
ENSCARG00000055954	Kif21a	Kinesin-Like Protein KIF21A	Molecular motor	0.62	***
ENSCARG00000043633	Kif26aa	Kinesin-Like Protein KIF26A	Molecular motor	−3.29	***
ENSCARG00000064202	M1ap	Meiosis 1 Associated Protein	Spermatogenesis	0.58	*
ENSCARG00000053540	Myo1b	Myosin 1b	Cell motility	1.05	**
ENSCARG00000065661	Myo3a	Myosin 3a	Cell motility	1.36	**
ENSCARG00000022649	Myo3b	Myosin 3b	Cell motility	−1.61	***
ENSCARG00000058703	Myo5aa	Myosin 5aa	Cell motility	−1.25	***
ENSCARG00000025821	Myo7ab	Myosin 7ab	Molecular motor	−1.47	***
ENSCARG00000014750	Myo10l1	Myosin 10, Like 1	Molecular motor	1.37	***
ENSCARG00000069662	Myo15b	Myosin 15	Molecular motor	1.42	***
ENSCARG00000056359	Pak1	P21 (RAC1) Activated Kinase 1	Cytoskeleton organization	−0.57	*
ENSCARG00000008473	Pak6a	P21 Activated Kinase 6a	Cytoskeleton organization, Androgen signalling	−1.14	***
ENSCARG00000042990	Pak7	P21 (RAC1) Activated Kinase 7	Cytoskeleton organization	−0.99	**
ENSCARG00000045144	Pfn1	Profilin 1	Cytoskeleton organization	−1.40	*
ENSCARG00000004805	Piwil2	Piwi-Like Protein 2	Spermatocytes differentiation	0.47	**
ENSCARG00000044904	Plxnb1a	Plexin-B1-Like	Cell adhesion	−0.46	*
ENSCARG00000019805	Rhoab	Rho-Related GTP-Binding Protein Rhoa-B	Cytoskeleton organization	−1.05	***
ENSCARG00000007149	Spag1a	Sperm Associated Antigen 1a	Axoneme assembly	1.29	***
ENSCARG00000022120	Syce2	Synaptonemal Complex Central Element Protein 2	Synaptonemal complex assembly	−0.81	*
ENSCARG00000055357	Spef2	Sperm flagellar 2	Sperm flagellum assembly	0.92	*
ENSCARG00000056199	Tekt4	Tektin 4	Spermatogenesis	−1.12	*
ENSCARG00000062861	Tekt1	Tektin-1-Like	Spermatogenesis	−2.09	***
ENSCARG00000025844	Thbs1	Thrombospondin 1	Cell adhesion	1.07	**
ENSCARG00000051875	Thbs2	Thrombospondin 2	Cell adhesion	0.93	**
ENSCARG00000029783	Thbs3	Thrombospondin 3	Cell adhesion	1.50	***
ENSCARG00000018165	Thbs4	Thrombospondin 4	Cell adhesion	−1.71	***
ENSCARG00000002324	Tmem67	Transmembrane Protein 67	Ciliogenesis	−1.01	***
ENSCARG00000068821	Tnnc2	Troponin C, Skeletal Muscle	Molecular motor	2.06	***
ENSCARG00000050269	Tnnc1b	Troponin C, Slow Skeletal and Cardiac Muscles-Like	Molecular motor	1.94	***
ENSCARG00000063547	Tnnt3b	Troponin T Type 3b (Skeletal, Fast)	Molecular motor	2.05	*
ENSCARG00000034258	Tnnt2d	Troponin T2d, Cardiac	Molecular motor	1.25	***
ENSCARG00000062526	Wdr19	WD Repeat Domain 19	Sperm flagellum	−1.11	***
ENSCARG00000067233	Wdr19	WD Repeat Domain 19	Sperm flagellum	−1.37	***

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