Table 8 Gene modules and pathways involved.
Gene module | Associated immune cells | Relationship with TP53 | Function in TME |
|---|---|---|---|
CXCL1/2/3/5/6/8 – CXCR1/2 | Neutrophils | Strong negative correlation | Drives neutrophil recruitment; upregulated in TP53-mutant COAD |
CCL2/CCL7 – CCR2 | Monocytes/M2 Macrophages | Negative correlation with TP53 | Promotes M2 polarization and immunosuppression |
CXCL11 – CXCR3 | Activated T cells, NK cells | Negatively correlated (ρ = -0.69) | Loss in TP53-low tumors impairs anti-tumor immunity |
PDGFRB | Cancer-associated fibroblasts (CAFs) | Negative correlation (p = 0.003) | Supports stromal remodeling and immune exclusion |