Table 3 Ploidy-specific H. annuus loci identified by MCSeED-based experiment.
Loci location | Ploidy- specificity | H. annuus sequence ID | eV | Query cover (%) | H. annuus L. annotation |
|---|---|---|---|---|---|
Chr1-7076494 | 3x | KAF5762472.1 | 0.0 | 100 | putative retrotransposon gag domain, aspartic peptidase domain superfamily |
Chr4-57374684 | 3x | KAJ0567750.1 | 6e− 47 | 15 | putative retrotransposon gag domain-containing protein |
Chr4-71286193 | 3x | KAF5779213.1 | 0.0 | 99 | putative nucleotidyltransferase, RibonucleaseH |
Chr9-183592207 | 3x | KAJ0948431.1 | 7e− 37 | 12 | hypothetical protein HanRHA438_ Chr01g0027151 |
Chr11-9462048 | 2x | XP_021990966.1 | 0.0 | 84 | protein FAR1-RELATED SEQUENCE 5-like |
Chr16-187730844 | 3x | KAJ0642001.1 | 0.0 | 87 | putative Heat shock protein 70 family |