Table 9 Information on the 10 most significant gene sets in MAGMA gene set enrichment analysis.
Gene Set | N genes | Beta | Beta STD | SE | P | Pbon |
|---|---|---|---|---|---|---|
REACTOME_A_TETRASACCHARIDE_LINKER_SEQUENCE_IS_REQUIRED_FOR_GAG_SYNTHESIS | 2 | 3.9315 | 0.12194 | 0.53967 | 3.6004e − 13 | 3.82866536e − 09 |
REACTOME_DEFECTIVE_B4GALT7_CAUSES_EDS_PROGEROID_TYPE | 2 | 3.9315 | 0.12194 | 0.53967 | 3.6004e − 13 | 3.82866536e − 09 |
REACTOME_DEFECTIVE_EXT2_CAUSES_EXOSTOSES_2 | 2 | 3.9315 | 0.12194 | 0.53967 | 3.6004e − 13 | 3.82866536e − 09 |
REACTOME_DISEASES_ASSOCIATED_WITH_GLYCOSAMINOGLYCAN_METABOLISM | 2 | 3.9315 | 0.12194 | 0.53967 | 3.6004e − 13 | 3.82866536e − 09 |
REACTOME_HS_GAG_BIOSYNTHESIS | 2 | 3.9315 | 0.12194 | 0.53967 | 3.6004e − 13 | 3.82866536e − 09 |
REACTOME_ATTACHMENT_AND_ENTRY | 3 | 3.8564 | 0.14646 | 0.53686 | 7.3073e − 13 | 7.76692917e − 09 |
REACTOME_HEPARAN_SULFATE_HEPARIN_HS_GAG_METABOLISM | 4 | 3.719 | 0.16305 | 0.5249 | 1.4328e − 12 | 1.52277984e − 08 |
REACTOME_HS_GAG_DEGRADATION | 4 | 3.719 | 0.16305 | 0.5249 | 1.4328e − 12 | 1.52277984e − 08 |
PID_SYNDECAN_3_PATHWAY | 2 | 3.7129 | 0.11516 | 0.52961 | 2.3771e − 12 | 2.52590646e − 08 |
GOMF_OXIDOREDUCTASE_ACTIVITY_ACTING_ON_THE_CH_NH2_GROUP_OF_DONORS | 2 | 2.7264 | 0.084561 | 0.42274 | 9.3065e − 11 | 9.88815625e − 07 |