Table 2 The genes encoded in the micrococcin P1 and capidermicin-hourboring plasmid pHBC3_1.

From: Staphylococcus capitis strain producing dual bacteriocins, capidermicin and micrococcin P1, shows broad-spectrum antimicrobial activity

ORF

No.

Location

(bp)

Size

(aa)a

Homologue as determined by Protein BLAST (performed on 2024/11/13)

Source

Description(s)

Identity

(%)

Overlap

(aa)b

Accession no.

Remarks

1

373–522

49

Staphylococcus

Thiocillin/thiostrepton family thiazolyl peptide

100

49/49

WP_150820271.1

tclE

2

607–1266

219

Staphylococcus

SDR family NAD(P)-dependent oxidoreductase

100

219/219

WP_235063371.1

tclS

3

1282–1764

160

Staphylococcus capitis

hypothetical protein

100

160/160

WP_367010040.1

 

4

1783–2208

141

Staphylococcus

50 S ribosomal protein L11

100

141/141

WP_050956573.1

tclQ

5

2292–3011

239

Staphylococcus

hypothetical protein

99

238/239

WP_235063392.1

tclI

6

3004–4710

568

Staphylococcus

YcaO-like family protein

100

568/568

WP_235063391.1

tclJ

7

4723–7242

839

Staphylococcus

hypothetical protein

100

839/839

WP_235063390.1

tclK

8

7250–8044

264

Staphylococcus

lantibiotic dehydratase C-terminal domain-containing protein

99

262/264

WP_235063389.1

tclL

9

8044–8865

273

Staphylococcus

hypothetical protein

100

273/273

WP_235063388.1

tclM

10

8877–10,217

446

Staphylococcus

hypothetical protein

100

446/446

WP_235063387.1

tclN

11

10,232–10,939

235

Staphylococcus

SDR family NAD(P)-dependent oxidoreductase

100

235/235

WP_050956580.1

tclP

12

10,995–11,357

120

Staphylococcus

MerR family transcriptional regulator

100

120/120

WP_235063385.1

tclU

13

11,742–12,353

203

Staphylococcus

Recombinase family protein

100

203/203

WP_235063384.1

 

14

13,228–13,443

37

Staphylococcus arlettae

IS6 family transposase

84

31/37

HJG54849.1

 

15

13,502–14,113

203

Staphylococcus capitis

Stage II sporulation protein M

100

203/203

WP_186334415.1

 

16

15,537–15,689

50

Staphylococcus

aureocin A53 family class IId bacteriocin

100

50/50

WP_186334414.1

capidermicin

17

15,823–16,065

80

Staphylococcus

hypothetical protein

100

80/80

WP_186334413.1

 

18

16,318–16,800

160

Staphylococcus

PH domain-containing protein

100

160/160

WP_186334412.1

ydbS

19

16,804–18,210

468

Staphylococcus capitis

PH domain-containing protein

100

468/468

WP_186334411.1

ydbT

20

18,862–19,722

286

Staphylococcus capitis

RepB family plasmid replication initiator protein

100

286/286

WP_311051504.1

rep

21

20,253–20,813

186

Staphylococcus capitis

TIGR00730 family Rossman fold protein

100

186/186

WP_311051505.1

 

22

21,210–21,338

42

Staphylococcus capitis

hypothetical protein

100

42/42

WP_311051506.1

 

23

21,919–22,305

128

Staphylococcus

plasmid mobilization protein

100

128/128

WP_070597544.1

 

24

22,457–22,714

85

Staphylococcus capitis

hypothetical protein

98

83/85

WP_311046203.1

 

25

22,895–23,407

170

Staphylococcus capitis

tyrosine–tRNA ligase

100

170/170

BFL68896.1

 

26

23,486–23,947

153

Streptococcus pyogenes

tyrosine–tRNA ligase

98

150/153

HES1124857.1

 

27

24,088–24,768

226

Staphylococcus capitis

DUF536 domain-containing protein

100

226/226

WP_367010039.1

 

28

25,262–26,233

323

Staphylococcus capitis

replication initiator protein A

100

323/323

WP_311051507.1

repA

29

26,327–26,545

72

Staphylococcus capitis

hypothetical protein SKB0123_24270

100

72/72

BFL68899.1

 

30

27,129–27,401

90

Staphylococcus sp. HMSC055A09

hypothetical protein HMPREF2642_00115

100

90/90

OFM90643.1

 

31

27,487–27,846

119

Bacillales

hypothetical protein

100

119/119

WP_070597492.1

 

32

27,849–27,995

48

Staphylococcus

hypothetical protein

100

48/48

WP_176744836.1

 

33

28,344–28,475

43

Staphylococcus capitis

hypothetical protein SKB0123_24310

100

43/43

BFL68903.1

 

34

28,496–29,170

224

Staphylococcus capitis

IS6 family transposase

100

224/224

WP_311058738.1

 

35

29,200–29,544

114

Bacillales

hypothetical protein

100

114/114

WP_070597562.1

 

36

29,738–29,881

47

Staphylococcus capitis

hypothetical protein SKB0123_24340

100

47/47

BFL68906.1

 

37

30,466–30,645

59

Bacillales

CsbD family protein

100

59/59

WP_096925940.1

 

38

30,777–31,175

132

Staphylococcus

YolD-like family protein

100

132/132

WP_129795299.1

 
  1. a aa, amino acids.
  2. b Overlap is indicated as the number of overlapping amino acids/total number of amino acids.