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Interaction mechanisms between liquid organic matter and solid bitumen
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  • Published: 20 January 2026

Interaction mechanisms between liquid organic matter and solid bitumen

  • Xiao–Hui Lin1,
  • Tian Liang2,
  • Yan–Rong Zou2,
  • Yuan Wang1 &
  • …
  • Yu Zou1 

Scientific Reports , Article number:  (2026) Cite this article

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We are providing an unedited version of this manuscript to give early access to its findings. Before final publication, the manuscript will undergo further editing. Please note there may be errors present which affect the content, and all legal disclaimers apply.

Subjects

  • Fossil fuels
  • Geochemistry

Abstract

As a hydrocarbon–rich byproduct of petroleum systems, natural solid bitumen demonstrates dual dissolution and adsorption functionalities toward liquid hydrocarbons. Elucidating these adsorption mechanisms provides critical insights into hydrocarbon expulsion dynamics during bitumen secondary cracking and informs strategies for fluidity modulation. This molecular–scale investigation systematically examines interfacial binding mechanisms governing bitumen–hydrocarbon interactions. Building upon atomistically resolved models, semi–flexible docking simulations were conducted across hydrocarbon compound classes and thermal maturation stages. Quantitative analysis of binding Gibbs free energy differentials between saturated and aromatic hydrocarbons revealed distinct interaction modalities governing solid–liquid organic interfaces. These interfacial interactions exhibit four governing parameters: hydrocarbon type, molecular weight, methyl group density at organic interfaces, and condensation degree. High molecular weight polycyclic aromatic hydrocarbons with elevated condensation degrees and their derivatives display enhanced binding affinities, contrasting with the weak retention observed for light hydrocarbons, small cycloalkanes, and low–weight aromatic species.

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Data availability

No datasets were generated or analysed during the current study.

References

  1. Jacob, H. Classification, structure, genesis and practical importance of natural solid oil bitumen (migrabitumen). Int. J. Coal Geol. 11, 65–79. https://doi.org/10.1016/0166-5162(89)90113-4 (1989).

    Google Scholar 

  2. Lomando, A. The influence of solid reservoir bitumen on reservoir quality. AAPG Bull. 76, 1137–1152. https://doi.org/10.1306/BDFF8984-1718-11D7–8645000102C1865D (1992).

    Google Scholar 

  3. Mastalerz, M., Drobniak, A. & Stankiewicz, A. B. Origin, properties, and implications of solid bitumen in source–rock reservoirs: A review. Int. J. Coal Geol. 195, 14–36. https://doi.org/10.1016/j.coal.2018.05.013 (2018).

    Google Scholar 

  4. Emmanuel, S., Eliyahu, M., Day–Stirrat, R. J., Hofmann, R. & Macaulay, C. I. Impact of thermal maturation on nano–scale elastic properties of organic matter in shales. Mar. Pet. Geol. 70, 175–184. https://doi.org/10.1016/j.marpetgeo.2015.12.001 (2016).

    Google Scholar 

  5. Craddock, P. R. et al. Evolution of kerogen and bitumen during thermal maturation via semi–open pyrolysis investigated by infrared spectroscopy. Energy Fuels. 29, 2197–2210. https://doi.org/10.1021/ef5027532 (2015).

    Google Scholar 

  6. Wood, J. M., Sanei, H., Curtis, M. E. & Clarkson, C. R. Solid bitumen as a determinant of reservoir quality in an unconventional tight gas siltstone play. Int. J. Coal Geol. 150, 287–295. https://doi.org/10.1016/j.coal.2015.02.001 (2015).

    Google Scholar 

  7. Cardott, B. J., Landis, C. R. & Curtis, M. E. Post–oil solid bitumen network in the Woodford Shale, USA—A potential primary migration pathway. Int. J. Coal Geol. 139, 106–113. https://doi.org/10.1016/j.coal.2014.07.013 (2015).

    Google Scholar 

  8. Huang, D. Advances in hydrocarbon generation theory: II. Oils from coal and their primary migration model. J. Pet. Sci. Eng. 22, 131–139. https://doi.org/10.1016/S0920-4105(98)00062-X (1999).

    Google Scholar 

  9. Wu, L., Liao, Y., Fang, Y. & Geng, A. The study on the source of the oil seeps and bitumens in the Tianjingshan structure of the Northern longmen mountain structure of Sichuan Basin, China. Mar. Pet. Geol. 37, 147–161. https://doi.org/10.1016/j.marpetgeo.2012.06.002 (2012).

    Google Scholar 

  10. Jacob, H. in ERDOL UND KOHLE ERDGAS PETROCHEMIE.

  11. Jehlička, J., Urban, O. & Pokorný, J. Raman spectroscopy of carbon and solid bitumens in sedimentary and metamorphic rocks. Spectrochim. Acta Part A Mol. Biomol. Spectrosc. 59, 2341–2352. https://doi.org/10.1016/S1386-1425(03)00077-5 (2003).

    Google Scholar 

  12. Yarranton, H., Grimaldos, F., Schoeggl, F., Martinez, J. & Richardson, W. Correlation for the diffusivity of gaseous and liquid hydrocarbons with bitumen. Energy Fuels. 35, 11246–11256. https://doi.org/10.1021/acs.energyfuels.1c01594 (2021).

    Google Scholar 

  13. Xiong, Y. et al. Formation and evolution of solid bitumen during oil cracking. Mar. Pet. Geol. 78, 70–75. https://doi.org/10.1016/j.marpetgeo.2016.09.006 (2016).

    Google Scholar 

  14. Misch, D. et al. Solid bitumen in shales: petrographic characteristics and implications for reservoir characterization. Int. J. Coal Geol. 205, 14–31. https://doi.org/10.1016/j.coal.2019.05.008 (2019).

    Google Scholar 

  15. Pomerantz, A. E. et al. Sulfur speciation in kerogen and bitumen from gas and oil shales. Org. Geochem. 68, 5–12. https://doi.org/10.1016/j.orggeochem.2013.12.008 (2014).

    Google Scholar 

  16. Shi, C. H., Cao, J., Tan, X. C., Luo, B. & Zeng, W. Discovery of oil bitumen co–existing with solid bitumen in the lower cambrian Longwangmiao giant gas reservoir, Sichuan Basin, Southwestern china: implications for hydrocarbon accumulation process. Org. Geochem. 108, 61–81. https://doi.org/10.1016/j.orggeochem.2017.03.003 (2017).

    Google Scholar 

  17. Li, Y. et al. Research status, geological significance and development trend of solid bitumen in reservoirs. J. Jilin Univ. (Earth Sci. Ed). 50, 732–746. https://doi.org/10.13278/j.cnki.jjuese.20200806 (2020).

    Google Scholar 

  18. Shalaby, M. R., Hakimi, M. H. & Abdullah, W. H. Geochemical characterization of solid bitumen (migrabitumen) in the jurassic sandstone reservoir of the Tut Field, Shushan Basin, Northern Western desert of Egypt. Int. J. Coal Geol. 100, 26–39. https://doi.org/10.1016/j.coal.2012.05.002 (2012).

    Google Scholar 

  19. Liang, T., Zhan, Z. W., Zou, Y. R., Lin, X. H. & Shan, Y. Research on type I kerogen molecular simulation and Docking between kerogen and saturated hydrocarbon molecule during oil generation. Chem. Geol. 617, 121263. https://doi.org/10.1016/j.chemgeo.2022.121263 (2023).

    Google Scholar 

  20. Cheng, B. et al. The geochemical characterization of adsorbed/occluded hydrocarbons inside solid bitumen in the Kuangshanliang area of the Northwestern Sichuan basin and its significance. Pet. Sci. Technol. 32, 2203–2211. https://doi.org/10.1080/10916466.2014.939223 (2014).

    Google Scholar 

  21. Bazyleva, A. B., Hasan, M. A., Fulem, M., Becerra, M. & Shaw, J. M. Bitumen and heavy oil rheological properties: reconciliation with viscosity measurements. J. Chem. Eng. Data. 55, 1389–1397. https://doi.org/10.1021/je9008892 (2010).

    Google Scholar 

  22. Zhang, Q., Huang, H., Zheng, L. & Qin, J. Secondary hydrocarbon generation potential from heavy oil, oil sand and solid bitumen during the artificial maturation. Org. Geochem. 38, 2024–2035. https://doi.org/10.1016/j.orggeochem.2007.08.006 (2007).

    Google Scholar 

  23. Petrov, D. et al. in EGU General Assembly Conference Abstracts. EGU22–7504.

  24. Erastova, V. et al. Unravelling guest dynamics in crystalline molecular organics using 2H solid–state NMR and molecular dynamics simulation. J. Am. Chem. Soc. 146, 18360–18369. https://doi.org/10.1021/jacs.4c06282 (2024).

    Google Scholar 

  25. Sepideh, R., Joel, K. & Ilona, K. Molecular dynamics simulations: insight into molecular phenomena at interfaces. Langmuir 30, 11272–11283. https://doi.org/10.1021/la500376z (2014).

    Google Scholar 

  26. Naqvi, A. A., Mohammad, T., Hasan, G. M. & Hassan, M. I. Advancements in Docking and molecular dynamics simulations towards ligand–receptor interactions and structure–function relationships. Curr. Top. Med. Chem. 18, 1755–1768. https://doi.org/10.2174/1568026618666180625121434 (2018).

    Google Scholar 

  27. Pinzi, L. & Rastelli, G. Molecular docking: shifting paradigms in drug discovery. Int. J. Mol. Sci. 20, 4331. https://doi.org/10.3390/ijms20174331 (2019).

    Google Scholar 

  28. Singh, S., Baker, Q. B. & Singh, D. B. Molecular Docking and molecular dynamics simulation. Bioinformatics 291–304 (Elsevier, 2022). https://doi.org/10.1016/B978-0-323-89775-4.00014-6

  29. Lu, X., Shi, G., Wang, S. & Xiao, J. –x. Oxidation characterization of water immersion coal on pore evolution and oxygen adsorption behavior. Nat. Resour. Res. 33, 925–942. https://doi.org/10.1007/s11053-024-10314-8 (2024).

    Google Scholar 

  30. Macorano, A. et al. An improved dataset of force fields, electronic and physicochemical descriptors of metabolic substrates. Sci. Data. 11, 929. https://doi.org/10.1038/s41597-024-03707-0 (2024).

    Google Scholar 

  31. Suwa, T., Ueki, Y. & Shibahara, M. Molecular dynamics study on effects of nanostructures on adsorption onto solid surface. Comput. Fluids. 164, 12–17. https://doi.org/10.1016/j.compfluid.2017.11.002 (2018).

    Google Scholar 

  32. Chaowei, H. et al. Sedimentary environment, hydrocarbon potential and development of black rocks in upper Maokou Formation, Northwestern Sichuan. Pet. Geol. Exp. 202–214. https://doi.org/10.11743/pge20200206 (2020).

  33. Jie, W. et al. Definition of petroleum generating time for lower cambrian bitumen of the Kuangshanliang in the West Sichuan Basin, china: evidence from Re–Os isotopic isochron age. Nat. Gas Geosci. 27, 1290–1298. https://doi.org/10.11764/j.issn.1672-1926.2016.07.1290 (2019).

    Google Scholar 

  34. Liang, T., Zhan, Z. W., Mejia, J., Zou, Y. R. & Peng, P. a. Hydrocarbon generation characteristics of solid bitumen and molecular simulation based on the density functional theory. Mar. Pet. Geol. 134, 105369. https://doi.org/10.1016/j.marpetgeo.2021.105369 (2021).

    Google Scholar 

  35. Frisch, M. J. et al. Gaussian 16, Revision B.01, (2016).

  36. Dennington, R., Todd, A., Keith, T. A. & Millam, J. M. Semichem, Inc., Shawnee Mission, KS, GaussView, Version 6, (2016).

  37. Teh, Y. & Rangaiah, G. A study of equation–solving and Gibbs free energy minimization methods for phase equilibrium calculations. Chem. Eng. Res. Des. 80, 745–759. https://doi.org/10.1205/026387602760233481 (2002).

    Google Scholar 

  38. Mango, F. D. The origin of light hydrocarbons in petroleum: ring preference in the closure of carbocyclic rings. Geochim. Cosmochim. Acta. 58, 895–901. https://doi.org/10.1016/0016-7037(94)90513-4 (1994).

    Google Scholar 

  39. Cerniglia, C. E. Biodegradation of polycyclic aromatic hydrocarbons. Curr. Opin. Biotechnol. 4, 331–338. https://doi.org/10.1016/S0958 (1993). –1669(93)80053–X.

    Google Scholar 

  40. Feng, W., Li, Z., Gao, H., Wang, Q., Bai, H., & Li, P. Understanding the molecular structure of HSW coal at atomic level: A comprehensive characterization from combined experimental and computational study. Green Energy Environ, 6, 150–159 (2021). https://doi.org/10.1016/j.gee.2020.03.013

  41. Liang, T. et al. Study on the swelling of macromolecular geological organic matter with hydrocarbons and heteroatomic compounds. Org. Geochem. 193 https://doi.org/10.1016/j.orggeochem.2024.104809 (2024).

  42. Li, H., Han, Z., Kong, X., Wang, Y. & Song, L. Adsorption characteristics and influencing factors of chlorinated and aromatic hydrocarbons on aquifer medium. Water 15 https://doi.org/10.3390/w15081539 (2023).

  43. Endo, S., Grathwohl, P. & Schmidt, T. C. Absorption or adsorption? Insights from molecular Probesn–Alkanes and cycloalkanes into modes of sorption by environmental solid matrices. Environ. Sci. Technol. 42, 3989–3995. https://doi.org/10.1021/es702470g (2008).

    Google Scholar 

  44. Handle, F. et al. Tracking aging of bitumen and its Saturate, Aromatic, Resin, and asphaltene fractions using High–Field fourier transform ion cyclotron resonance mass spectrometry. Energy Fuels. 31, 4771–4779. https://doi.org/10.1021/acs.energyfuels.6b03396 (2017).

    Google Scholar 

  45. Kalpathy, S. V., Poddar, N. B., Bagley, S. P. & Wornat, M. J. Reaction pathways for the growth of polycyclic aromatic hydrocarbons during the supercritical pyrolysis of n–decane, as determined from doping experiments with 1– and 2–methylnaphthalene. Proc. Combust. Inst. 35, 1833–1841. https://doi.org/10.1016/j.proci.2014.06.129 (2015).

    Google Scholar 

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Funding

This work was financially supported by National Natural Science Foundation of China (NSFC, Grant No. U24B6001), Basic and Applied Basic Research Foundation of Guangdong Province (2023A1515011646) and Director’s Fund of Guangzhou Institute of Geochemistry, CAS (E2510103).

Author information

Authors and Affiliations

  1. Wuxi Research Institute of Petroleum Geology, Petroleum Exploration and Production Research Institute, SINOPEC, Wuxi, 214126, China

    Xiao–Hui Lin, Yuan Wang & Yu Zou

  2. State Key Laboratory of Deep Earth Processes and Resources, Guangzhou Institute of Geochemistry, Chinese Academy of Sciences, Guangzhou, 510640, China

    Tian Liang & Yan–Rong Zou

Authors
  1. Xiao–Hui Lin
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  2. Tian Liang
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  3. Yan–Rong Zou
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Contributions

Xiao–Hui Lin:Methodology, Formal analysis,Writing – Original DraftTian Liang:Supervision, Project administrationYan–Rong Zou:Conceptualization, Validation, ResourcesYuan Wang:Data Curation, SoftwareYu Zou:Visualization, Formal Analysis.

Corresponding author

Correspondence to Tian Liang.

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Cite this article

Lin, X., Liang, T., Zou, Y. et al. Interaction mechanisms between liquid organic matter and solid bitumen. Sci Rep (2026). https://doi.org/10.1038/s41598-026-36636-6

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  • Received: 18 May 2025

  • Accepted: 14 January 2026

  • Published: 20 January 2026

  • DOI: https://doi.org/10.1038/s41598-026-36636-6

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Keywords

  • Solid bitumen
  • Liquid hydrocarbon
  • Molecular docking
  • Interaction
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