Table 4 GenBank accession numbers of the DNA sequences used in phylogenetic analysis and pathogenicity of our isolates.
Species | Isolates | Locations | GenBank accession no | ||
|---|---|---|---|---|---|
ITS | β-tubulin | tef1a | |||
Apiospora malaysiana | CBS 102,053 | – | KF144896 | KF144988 | KF145030 |
A. pseudoparenchymatica | LC7234* | – | KY494743 | KY705211 | KY705139 |
Nigrospora aurantiaca | CGMCC 3.18130* | – | KX986064 | KY019465 | KY019295 |
N. aurantiaca | LC7034 | – | KX986093 | KY019598 | KY019394 |
N. bambusae | CGMCC 3.18327* | – | KY385307 | KY385319 | KY385313 |
LC7245 | – | KY385305 | KY385321 | KY385315 | |
N. brasiliensis | CMM 1214* | – | KY569629 | MK720816 | MK753271 |
CMM 1217 | – | KY569630 | MK720817 | MK753272 | |
N. camelliae-sinensis | CGMCC 3.18125* | – | KX985986 | KY019460 | KY019293 |
N. chinensis | LC6851 | – | KX986049 | KY019579 | KY019450 |
CGMCC 3.18127* | – | KX986023 | KY019462 | KY019422 | |
TAP24N249 | Dabong-dabong | LC868051 | LC868104 | LC868157 | |
N. covidalis | CGMCC 3.20538* | – | OK335209 | OK431479 | OK431485 |
LC158337 | – | OK335210 | OK431480 | OK431486 | |
LC2725 | – | KX985960 | KY019487 | KY019313 | |
LC4566 | – | KX986022 | KY019545 | KY019354 | |
N. endophytica | A.R.M. 687 | – | OM265226 | OP572418 | OP572415 |
A.R.M. 973* | – | OM265233 | OP572420 | OP572416 | |
N. falsivesicularis | CGMCC 3.19678* | – | MN215778 | MN329942 | MN264017 |
LC13553 | – | MN215779 | MN329943 | MN264018 | |
N. globospora | CGMCC 3.20539* | – | OK335211 | OK431481 | OK431487 |
LC15839 | – | OK335212 | OK431482 | OK431488 | |
N. gorlenkoana | CBS 480.73* | – | KX986048 | KY019456 | KY019420 |
N. guangdongensis | CFCC:53,917* | – | MT017509 | MT024495 | MT024493 |
N. guilinensis | LC7301 | – | KX986063 | KY019608 | KY019404 |
CGMCC 3.18124* | – | KX985983 | KY019459 | KY019292 | |
N. hainanensis | CGMCC 3.18129* | – | KX986091 | KY019464 | KY019415 |
A.R.M.967 | – | OM265228 | OM793057 | OM642834 | |
A.R.M.968 | – | OM265229 | OM793058 | OM642835 | |
A.R.M.972 | – | OM265232 | OP572419 | OM642837 | |
A.R.M.976 | – | OM265236 | OM793060 | OP572417 | |
N. lacticolonia | CGMCC 3.18123* | – | KX985978 | KY019458 | KY019291 |
A.R.M. 921 | – | OM265227 | OM642838 | OM642833 | |
TAP24N001 | Ula | LC846677 | LC846784 | LC846891 | |
TAP24N003 | Ula | LC846678 | LC846785 | LC846892 | |
TAP24N005 | Ula | LC846679 | LC846786 | LC846893 | |
TAP24N006 | Ula | LC846680 | LC846787 | LC846894 | |
TAP24N008 | Ula | LC846681 | LC846788 | LC846895 | |
TAP24N010 | Ula | LC846682 | LC846789 | LC846896 | |
TAP24N011 | Ula | LC846683 | LC846790 | LC846897 | |
TAP24N012 | Ula | LC846684 | LC846791 | LC846898 | |
TAP24N013 | Ula | LC846685 | LC846792 | LC846899 | |
TAP24N014 | Ula | LC846686 | LC846793 | LC846900 | |
TAP24N016 | Ula | LC846687 | LC846794 | LC846901 | |
TAP24N017 | Ula | LC846688 | LC846795 | LC846902 | |
TAP24N018 | Ula | LC846689 | LC846796 | LC846903 | |
TAP24N019 | Ula | LC846690 | LC846797 | LC846904 | |
TAP24N021 | Ula | LC846691 | LC846798 | LC846905 | |
TAP24N022 | Ula | LC846692 | LC846799 | LC846906 | |
TAP24N026 | Ula | LC846694 | LC846801 | LC846908 | |
TAP24N027 | Ula | LC846695 | LC846802 | LC846909 | |
TAP24N028 | Ula | LC846696 | LC846803 | LC846910 | |
TAP24N029 | Ula | LC846697 | LC846804 | LC846911 | |
TAP24N030 | Ula | LC846698 | LC846805 | LC846912 | |
TAP24N031 | Ula | LC846699 | LC846806 | LC846913 | |
TAP24N033 | Ula | LC846700 | LC846807 | LC846914 | |
TAP24N035 | Ula | LC846702 | LC846809 | LC846916 | |
TAP24N036 | Ula | LC846703 | LC846810 | LC846917 | |
TAP24N038 | Ula | LC846704 | LC846811 | LC846918 | |
TAP24N039 | Ula | LC846705 | LC846812 | LC846919 | |
TAP24N041 | Ula | LC846706 | LC846813 | LC846920 | |
TAP24N043 | Ula | LC846707 | LC846814 | LC846921 | |
TAP24N045 | Ula | LC846708 | LC846815 | LC846922 | |
TAP24N047 | Ula | LC846709 | LC846816 | LC846923 | |
TAP24N048 | Tugbok | LC846710 | LC846817 | LC846924 | |
TAP24N050 | Tugbok | LC846712 | LC846819 | LC846926 | |
TAP24N053 | Tugbok | LC846713 | LC846820 | LC846927 | |
TAP24N054 | Tugbok | LC846714 | LC846821 | LC846928 | |
TAP24N055 | Tugbok | LC846715 | LC846822 | LC846929 | |
TAP24N057 | Tugbok | LC846716 | LC846823 | LC846930 | |
TAP24N060 | Tugbok | LC846717 | LC846824 | LC846931 | |
TAP24N062 | Tugbok | LC846718 | LC846825 | LC846932 | |
TAP24N063 | Tugbok | LC846719 | LC846826 | LC846933 | |
TAP24N065 | Tugbok | LC846720 | LC846827 | LC846934 | |
TAP24N067 | Tugbok | LC846721 | LC846828 | LC846935 | |
TAP24N069 | Tugbok | LC846723 | LC846830 | LC846937 | |
TAP24N071 | Tugbok | LC846724 | LC846831 | LC846938 | |
TAP24N073 | Tugbok | LC846725 | LC846832 | LC846939 | |
TAP24N074 | Tugbok | LC846726 | LC846833 | LC846940 | |
TAP24N077 | Tugbok | LC846727 | LC846834 | LC846941 | |
TAP24N078 | Tugbok | LC846728 | LC846835 | LC846942 | |
TAP24N079 | Tugbok | LC846676 | LC846783 | LC846890 | |
TAP24N082 | Little Panay | LC846730 | LC846837 | LC846944 | |
TAP24N085 | Little Panay | LC846731 | LC846838 | LC846945 | |
TAP24N086 | Little Panay | LC846732 | LC846839 | LC846946 | |
TAP24N088 | Little Panay | LC846733 | LC846840 | LC846947 | |
TAP24N090 | Little Panay | LC846734 | LC846841 | LC846948 | |
TAP24N091 | Little Panay | LC846735 | LC846842 | LC846949 | |
TAP24N092 | Little Panay | LC846736 | LC846843 | LC846950 | |
TAP24N093 | Little Panay | LC846737 | LC846844 | LC846951 | |
TAP24N094 | Little Panay | LC846738 | LC846845 | LC846952 | |
TAP24N095 | Little Panay | LC846739 | LC846846 | LC846953 | |
TAP24N096 | Little Panay | LC846740 | LC846847 | LC846954 | |
TAP24N098 | Little Panay | LC846741 | LC846848 | LC846955 | |
TAP24N099 | Little Panay | LC846742 | LC846849 | LC846956 | |
TAP24N100 | Little Panay | LC846743 | LC846850 | LC846957 | |
TAP24N101 | Little Panay | LC846744 | LC846851 | LC846958 | |
TAP24N102 | Little Panay | LC846745 | LC846852 | LC846959 | |
TAP24N103 | Little Panay | LC846746 | LC846853 | LC846960 | |
TAP24N104 | Little Panay | LC846747 | LC846854 | LC846961 | |
TAP24N105 | Little Panay | LC846748 | LC846855 | LC846962 | |
TAP24N108 | Little Panay | LC846750 | LC846857 | LC846964 | |
TAP24N112 | Little Panay | LC846751 | LC846858 | LC846965 | |
TAP24N113 | Little Panay | LC846752 | LC846859 | LC846966 | |
TAP24N115 | Little Panay | LC846753 | LC846860 | LC846967 | |
TAP24N118 | Little Panay | LC846754 | LC846861 | LC846968 | |
TAP24N123 | Little Panay | LC846756 | LC846863 | LC846970 | |
TAP24N125 | Little Panay | LC846757 | LC846864 | LC846971 | |
TAP24N127 | Little Panay | LC846758 | LC846865 | LC846972 | |
TAP24N128 | Little Panay | LC846759 | LC846866 | LC846973 | |
TAP24N129 | Little Panay | LC846760 | LC846867 | LC846974 | |
TAP24N131 | Little Panay | LC846761 | LC846868 | LC846975 | |
TAP24N132 | Panombon | LC846762 | LC846869 | LC846976 | |
TAP24N134 | Panombon | LC846763 | LC846870 | LC846977 | |
TAP24N136 | Panombon | LC846764 | LC846871 | LC846978 | |
TAP24N139 | Panombon | LC846766 | LC846873 | LC846980 | |
TAP24N141 | Panombon | LC846767 | LC846874 | LC846981 | |
TAP24N145 | Panombon | LC846768 | LC846875 | LC846982 | |
TAP24N146 | Panombon | LC846769 | LC846876 | LC846983 | |
TAP24N149 | Panombon | LC846770 | LC846877 | LC846984 | |
TAP24N154 | Panombon | LC846771 | LC846878 | LC846985 | |
TAP24N156 | Panombon | LC846772 | LC846879 | LC846986 | |
TAP24N157 | Panombon | LC846773 | LC846880 | LC846987 | |
TAP24N163 | Panombon | LC846774 | LC846881 | LC846988 | |
TAP24N164 | Panombon | LC846775 | LC846882 | LC846989 | |
TAP24N165 | Panombon | LC846776 | LC846883 | LC846990 | |
TAP24N166 | Panombon | LC846777 | LC846884 | LC846991 | |
TAP24N167 | Panombon | LC846778 | LC846885 | LC846992 | |
TAP24N168 | Panombon | LC846779 | LC846886 | LC846993 | |
TAP24N174 | Panombon | LC846780 | LC846887 | LC846994 | |
TAP24N176 | Panombon | LC846781 | LC846888 | LC846995 | |
TAP24N177 | Panombon | LC846782 | LC846889 | LC846996 | |
TAP24N204 | Patag-Alanib | LC868092 | LC868145 | LC868198 | |
TAP24N208 | Patag-Alanib | LC868088 | LC868141 | LC868194 | |
TAP24N209 | Patag-Alanib | LC868087 | LC868140 | LC868193 | |
TAP24N226 | Patag-Alanib | LC868097 | LC868150 | LC868203 | |
TAP24N230 | Dabong-dabong | LC868070 | LC868123 | LC868176 | |
TAP24N231 | Dabong-dabong | LC868069 | LC868122 | LC868175 | |
TAP24N233 | Dabong-dabong | LC868067 | LC868120 | LC868173 | |
TAP24N234 | Dabong-dabong | LC868066 | LC868119 | LC868172 | |
TAP24N235 | Dabong-dabong | LC868065 | LC868118 | LC868171 | |
TAP24N236 | Dabong-dabong | LC868064 | LC868117 | LC868170 | |
TAP24N238 | Dabong-dabong | LC868062 | LC868115 | LC868168 | |
TAP24N239 | Dabong-dabong | LC868061 | LC868114 | LC868167 | |
TAP24N240 | Dabong-dabong | LC868060 | LC868113 | LC868166 | |
TAP24N242 | Dabong-dabong, | LC868058 | LC868111 | LC868164 | |
TAP24N243 | Dabong-dabong | LC868057 | LC868110 | LC868163 | |
TAP24N245 | Dabong-dabong | LC868055 | LC868108 | LC868161 | |
TAP24N251 | Dabong-dabong | LC868049 | LC868102 | LC868155 | |
TAP24N254 | Dabong-dabong | LC868047 | LC868100 | LC868153 | |
TAP24N255 | Dabong-dabong | LC868046 | LC868099 | LC868152 | |
N. manihoticola | A.R.M. 645* | – | OM265224 | OM869479 | OM914791 |
N. musae | CBS 319.34* | – | KX986076 | KY019455 | KY019419 |
LC6385 | – | KX986042 | KY019567 | KY019371 | |
N. nigrocolonia | TAP24N202 | Patag-Alanib | LC868094 | LC868147 | LC868200 |
TAP24N222 | Patag-Alanib | LC868075 | LC868128 | LC868181 | |
TAP24N224 | Patag-Alanib | LC868073 | LC868126 | LC868179 | |
TAP24N229 | Dabong-dabong | LC868071 | LC868124 | LC868177 | |
TAP24N232 | Dabong-dabong | LC868068 | LC868121 | LC868174 | |
TAP24N237 | Dabong-dabong | LC868063 | LC868116 | LC868169 | |
TAP24N246 | Dabong-dabong | LC868054 | LC868107 | LC868160 | |
TAP24N250 | Dabong-dabong | LC868050 | LC868103 | LC868156 | |
TAP24N252 | Dabong-dabong | LC868048 | LC868101 | LC868154 | |
N. oryzae | LC2724 | – | KX985959 | KY019486 | KY019312 |
LC4265 | – | KX985994 | KY019518 | KY019335 | |
N. osmanthi | CGMCC 3.18126* | – | KX986010 | KY019461 | KY019421 |
LC4487 | – | KX986017 | KY019540 | KY019438 | |
N. pernambucoensis | A.R.M.651 | – | OM265225 | OM869480 | OM914792 |
A.R.M. 974* | – | OM265234 | OM869481 | OM914793 | |
N.philosophiae-doctoris | CGMCC 3.20540* | – | OK335214 | OK431484 | OK431490 |
N. pyriformis | CGMCC 3.18122* | – | KX985940 | KY019457 | KY019290 |
A.R.M.970 | – | OM265231 | OM642839 | OM513904 | |
N. rubi | LC2698* | – | KX985948 | KY019475 | KY019302 |
N. saccharicola | LC12057 | – | MN215789 | MN329952 | MN264028 |
CGMCC 3.19362* | – | MN215788 | MN329951 | MN264027 | |
N. sacchari-officinarum | CGMCC 3.19335* | – | MN215791 | MN329954 | MN264030 |
LC13531 | – | MN215792 | MN329955 | MN264031 | |
N. singularis | CGMCC 3.19334* | – | MN215793 | MN329956 | MN264032 |
LC12068 | – | MN215794 | MN329957 | MN264033 | |
TAP24N034 | Ula | LC846701 | LC846808 | LC846915 | |
TAP24N049 | Tugbok | LC846711 | LC846818 | LC846925 | |
TAP24N068 | Tugbok | LC846722 | LC846829 | LC846936 | |
TAP24N081 | Little Panay | LC846729 | LC846836 | LC846943 | |
TAP24N120 | Little Panay | LC846755 | LC846862 | LC846969 | |
TAP24N137 | Panombon | LC846765 | LC846872 | LC846979 | |
TAP24N201 | Patag-Alanib | LC868095 | LC868148 | LC868178 | |
TAP24N203 | Patag-Alanib | LC868093 | LC868146 | LC868199 | |
TAP24N205 | Patag-Alanib | LC868091 | LC868144 | LC868197 | |
TAP24N206 | Patag-Alanib | LC868090 | LC868143 | LC868196 | |
TAP24N207 | Patag-Alanib | LC868089 | LC868142 | LC868195 | |
TAP24N210 | Patag-Alanib | LC868086 | LC868139 | LC868192 | |
TAP24N211 | Patag-Alanib | LC868085 | LC868138 | LC868191 | |
TAP24N212 | Patag-Alanib | LC868084 | LC868137 | LC868190 | |
TAP24N213 | Patag-Alanib | LC868083 | LC868136 | LC868189 | |
TAP24N214 | Patag-Alanib | LC868082 | LC868135 | LC868188 | |
TAP24N215 | Patag-Alanib | LC868081 | LC868134 | LC868187 | |
TAP24N217 | Patag-Alanib | LC868080 | LC868133 | LC868186 | |
TAP24N218 | Patag-Alanib | LC868079 | LC868132 | LC868185 | |
TAP24N219 | Patag-Alanib | LC868078 | LC868131 | LC868184 | |
TAP24N220 | Patag-Alanib | LC868077 | LC868130 | LC868183 | |
TAP24N221 | Patag-Alanib | LC868076 | LC868129 | LC868182 | |
TAP24N223 | Patag-Alanib | LC868074 | LC868127 | LC868180 | |
TAP24N227 | Patag-Alanib | LC868063 | LC868125 | LC868178 | |
TAP24N241 | Dabong-dabong | LC868059 | LC868112 | LC868165 | |
TAP24N244 | Dabong-dabong | LC868056 | LC868109 | LC868162 | |
TAP24N247 | Dabong-dabong | LC868053 | LC868106 | LC868159 | |
TAP24N248 | Dabong-dabong | LC868052 | LC868105 | LC868158 | |
TAP24N256 | Dabong-dabong | LC868096 | LC868149 | LC868202 | |
TAP24N257 | Dabong-dabong | LC868045 | LC868098 | LC868151 | |
N. sphaerica | LC2839 | – | KX985964 | KY019491 | KY019317 |
LC2840 | – | KX985965 | KY019492 | KY019318 | |
TAP24N107 | Little Panay | LC846749 | LC846856 | LC846963 | |
Nigrospora sp. | LC6704 | – | KX986047 | KY019571 | KY019373 |
N. vesicularis | LC0322 | – | KX985939 | KY019467 | KY019296 |
CGMCC 3.18128* | – | KX986088 | KY019463 | KY019294 | |
N. vesicularifera | CGMCC 3.19333* | – | MN215812 | MN329975 | MN264051 |
A.R.M.975 | – | OM265235 | OM642840 | OM513905 | |
N. vesicularifera | TAP24N023 | Ula | LC846693 | LC846800 | LC846907 |
N. zimmermanii | CBS 290.62* | – | KY385309 | KY385317 | KY385311 |
CBS 984.69 | – | KY385310 | KY385322 | KY385316 | |