Table 11 The Docking interaction data calculations of the ligand and its complexes with the active sites of the receptor of cyclooxygenase-2 (PDB ID: 6COX).

From: Synthesis and biological evaluation of ibuprofen/o-vanillin Schiff base complexes with anti-inflammatory, anti-proliferative and anti-SARS-COV-19 activities

 

Receptor

Interaction

Distance(Å)*

E (kcal/mol)

HL

O 24

NH1 AR 44

H-acceptor

2.77 (1.79)

-6.2

[CuL(H2O)Cl]

O 2

OD1 ASP 362

H-donor

3.09 (2.35)

-2.0

O 2

OD2 ASP 362

H-donor

2.76 (1.82)

-21.5

O 2

OE1 GLU 364

H-donor

3.30 (2.47)

-0.9

O 2

OD1 ASP 362

Ionic

3.09

-3.9

O 2

OD2 ASP 362

Ionic

2.76

-6.3

O 2

OE1 GLU 364

Ionic

3.30

-2.8

[NiL(H2O)NO3]

O 2

O ARG 44

H-donor

2.54 (1.52)

-17.7

C 3

OD1 ASP 125

H-donor

3.21 (2.40)

-0.5

C 10

OD1 ASP 125

H-donor

3.05 (2.13)

-4.3

C 10

OD2 ASP 125

H-donor

3.18 (2.33)

-2.1

O 27

NH1 ARG 44

H-acceptor

2.64 (1.76)

-1.7

O 2

OE2 GLU 46

Ionic

3.07

-4.0

N 12

OD2 ASP 125

Ionic

3.47

-2.0

[VOL(H2O)OEt]

C 10

OE1 GLU 319

H-donor

3.13 (2.27)

-2.1

O 2

NZ LYS 56

H-acceptor

3.09 (2.23)

-1.5

O 29

NZ LYS 56

H-acceptor

2.79 (1.84)

-13.9

O 29

NZ LYS 56

Ionic

2.79

-6.0

6-ring

N GLU 553

pi-H

4.01

-0.7

[ZnL(H2O)3NO3]

O 2

OE1 GLU 553

H-donor

2.75 (2.04)

-5.3

C 22

SG CYS 59

H-donor

3.81 (2.81)

-0.7

O 59

OD1 ASP 58

H-donor

2.79 (1.85)

-21.6

O 63

NZ LYS 56

H-acceptor

3.17 (2.24)

-3.1

O 2

OE1 GLU 553

Ionic

2.75

-6.4

O 2

OE2 GLU 553

Ionic

2.87

-5.4

O 59

OD1 ASP 58

Ionic

2.79

-6.0

  1. *The lengths of H-bonds are in brackets.