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Prioritizing neglected food species in nutritional studies using expert-knowledge and explainable AI
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  • Published: 02 March 2026

Prioritizing neglected food species in nutritional studies using expert-knowledge and explainable AI

  • Michelle Cristine Medeiros Jacob1,
  • Aline Martins de Carvalho2,
  • Ângela Giovana Batista3,
  • Aníbal de Freitas Santos Júnior4,
  • Antonio Augusto Ferreira Carioca5,
  • Celia Márcia Medeiros de Morais6,
  • Cinthia Baú Betim Cazarin7,
  • Daniel Tregidgo8,
  • Danilo Vicente Batista de Oliveira9,
  • Dirce Maria Lobo Marchioni2,
  • Eliana Bistriche Giuntini10,
  • Elias Jacob de Menezes-Neto11,
  • Fillipe de Oliveira Pereira12,
  • Gabriela de Farias Moura1,
  • Hani R. El Bizri13,14,
  • Ingrid Wilza Leal Bezerra15,
  • Jailane de Souza Aquino16,
  • João Victor Mendes Silva17,
  • Josiane Steluti18,
  • Juliana Kelly da Silva-Maia15,
  • Juliana Araujo Teixeira19,
  • Lara Juliane Guedes da Silva1,
  • Letícia Zenóbia de Oliveira Campos20,
  • Marcela Alvares Oliveira21,
  • Maria Elieidy Gomes de Oliveira22,
  • Mariana de Paula Drewinski23,
  • Marina Maintinguer Norde24,
  • Nelson Menolli Jr23,
  • Priscila F. M. Lopes25,26,
  • Rafael Ricardo Vasconcelos da Silva27,
  • Rômulo Romeu Nóbrega Alves28,
  • Samara Camile Gomes da Silva29,
  • Sávio Marcelino Gomes30,
  • Severina Carla Vieira Cunha Lima31,
  • Thais Q. Morcatty32,33 &
  • …
  • Ulysses Paulino Albuquerque17 

Scientific Reports , Article number:  (2026) Cite this article

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We are providing an unedited version of this manuscript to give early access to its findings. Before final publication, the manuscript will undergo further editing. Please note there may be errors present which affect the content, and all legal disclaimers apply.

Subjects

  • Biodiversity
  • Machine learning
  • Nutrition
  • Sustainability

Abstract

Food biodiversity is vital for human health and the development of sustainable food systems. However, research on neglected and underutilized species is limited by funding, uneven research capacity, and the challenge of balancing ecological, cultural, and public health considerations, requiring innovative prioritization approaches. Using Brazil as a model, this study inventories 369 neglected food species across algae, aquatic fauna, wild terrestrial vertebrates, insects, mushrooms, and plants. A mixed-methods approach, combining expert knowledge and explainable AI (LightGBM and SHAP value analysis), identified key factors for prioritizing species for food composition and consumption studies. The inventory is dominated by plants (29.5%) and wild vertebrates (24.4%), with significant gaps in nutritional data, particularly for algae, insects, and wild vertebrates. Over 36,000 recipes using neglected species were identified. In both food composition (R2: 0.677) and consumption studies (R2: 0.782), recipe number and species occurrence across different states were the most influential features in predicting prioritization. These findings emphasize the role of cultural uses and local accessibility in shaping nutritional research priorities. We urge increased research on neglected species to bridge data gaps and integrate them into food systems, promoting sustainable diets in Brazil and other tropical regions.

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Data availability

The database and analysis scripts are available at this link https://github.com/eliasjacob/paper_bionut.

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Funding

This research was supported by the High-Performance Computing Center at UFRN (NPAD/UFRN) and the ‘Conselho Nacional de Desenvolvimento Científico e Tecnológico’ (CNPq) through a research grant to MCMJ (402334/2021–3) and AMC (444588/2023–0). The authors also thank CNPq for the research productivity scholarships awarded to EJMN (302582/2023–1), MCMJ (306755/2021–1), NMJ (314236/2021–0), and PFML (302365/2022–2). PFML acknowledges the funding from the Romanian Ministry of Research, Innovation and Digitalization for project JUST4MPA (760054, within the framework of PNRR-III-C9-2022—I8). AMC, MPD, and NMJ acknowledge the support of the Sao Paulo Research Foundation – FAPESP by, respectively, the following grants: 2022/03091–6, 2017/25754–9, and 2018/15677–0. HREB was supported by USAID agreement with CIFOR-ICRAF. CBBC also acknowledges the support from CNPq (306891/2021–2) and from the ‘Coordenação de Aperfeiçoamento de Pessoal de Nível Superior’ (CAPES) – Finance Code 001. The study received a contribution from the INCT Ethnobiology, Bioprospecting, and Nature Conservation, certified by CNPq, with financial support from the Foundation for Support to Science and Technology of the State of Pernambuco as a grant [Grant Number: APQ-0562–2.01/17] given to UPA.

Author information

Authors and Affiliations

  1. Laboratory of Biodiversity and Nutrition, Universidade Federal Do Rio Grande Do Norte, Avenida Senador Salgado Filho, S/N, Natal, RN, 59078-970, Brazil

    Michelle Cristine Medeiros Jacob, Gabriela de Farias Moura & Lara Juliane Guedes da Silva

  2. Department of Nutrition, School of Public Health, University of Sao Paulo, Sao Paulo, 01246-904, Brazil

    Aline Martins de Carvalho & Dirce Maria Lobo Marchioni

  3. Department of Nutrition, Universidade Federal de Juiz de Fora, Campus Governador Valadares, Governador Valadares, MG, Brazil

    Ângela Giovana Batista

  4. Department of Life Sciences, State University of Bahia–UNEB, Rua Silveira Martins, 2555, Cabula, Salvador, BH, 41150-000, Brazil

    Aníbal de Freitas Santos Júnior

  5. Department of Nutrition, Graduate Program in Public Health, University of Fortaleza, 1321 Washington Soares Avenue, Fortaleza, CE, 60811-905, Brazil

    Antonio Augusto Ferreira Carioca

  6. Department of Nutrition, Universidade Federal Do Rio Grande Do Norte, Avenida Senador Salgado Filho, S/N, Natal, RN, 59078-970, Brazil

    Celia Márcia Medeiros de Morais

  7. School of Food Engineering, Universidade Estadual de Campinas, Rua Monteiro Lobato, 80, Campinas, SP, 13083-862, Brazil

    Cinthia Baú Betim Cazarin

  8. Instituto de Desenvolvimento Sustentável Mamirauá, Estrada Do Bexiga, 2584, Bairro Fonte Boa, Tefé, Amazonas, 69553-225, Brazil

    Daniel Tregidgo

  9. ESG & Compliance, Masterboi LTDA, Av. da Recuperação, 7380, Dois Irmãos, Recife, PE, 52291-000, Brazil

    Danilo Vicente Batista de Oliveira

  10. Food Research Center, Universidade de São Paulo (FoRC/USP), Rua Do Lago, 250 Bloco C, Butantã, SP, 05508-080, Brazil

    Eliana Bistriche Giuntini

  11. Instituto Metrópole Digital, Universidade Federal Do Rio Grande Do Norte, Av. Cap. Mor Gouveia, S/N, Lagoa Nova, Natal, RN, 59078-970, Brazil

    Elias Jacob de Menezes-Neto

  12. Fungi Research Group, Academic Unit of Health, Education, and Health Center, Federal University of Campina Grande, Sítio Olho D’água da Bica S/N, Cuité, PB, 58175-000, Brazil

    Fillipe de Oliveira Pereira

  13. Center for International Forestry Research and World Agroforestry (CIFOR-ICRAF), Jalan CIFOR Situ Gede, Bogor Barat, Bogor, 16115, Indonesia

    Hani R. El Bizri

  14. Rede de Pesquisa Em Biodiversidade, Conservação e Uso da Fauna da Amazônia (RedeFauna), Manaus, 69067-375, Brazil

    Hani R. El Bizri

  15. Department of Nutrition, Universidade Federal Do Rio Grande Do Norte, Avenida Salgado Filho, S/N, Natal, RN, 59078-970, Brazil

    Ingrid Wilza Leal Bezerra & Juliana Kelly da Silva-Maia

  16. Experimental Nutrition Laboratory, Department of Nutrition, Health Sciences Center, Federal University of Paraiba, R. Tabelião Stanislau Eloy, S/N, Castelo Branco, João Pessoa, PB, 58050-585, Brazil

    Jailane de Souza Aquino

  17. Laboratório de Ecologia E Evolução de Sistemas Socioecológicos, Departamento de Botânica, Universidade Federal de Pernambuco, Recife, PE, 50670-900, Brazil

    João Victor Mendes Silva & Ulysses Paulino Albuquerque

  18. Departamento de Políticas Públicas E Saúde Coletiva, Instituto Saúde E Sociedade, Campus Baixada Santista, Universidade Federal de São Paulo, Rua Silva Jardim, n° 136, Santos, SP, CEP: 11015-020, Brazil

    Josiane Steluti

  19. Brazilian Center for Early Childhood Development, Insper, Rua Quatá, 300, São Paulo, SP, 04546-042, Brazil

    Juliana Araujo Teixeira

  20. Departamento de Ciências Biológicas, Universidade Federal Do Oeste da Bahia (UFOB), Rua da Prainha, N. 1326, Morada Nobre, Barreiras, BA, 47810-047, Brazil

    Letícia Zenóbia de Oliveira Campos

  21. Programa de Pós-Graduação Em Conservação E Uso de Recursos Naturais, Universidade Federal de Rondônia, Br 364, S/N, Zona Rural, Porto Velho, RO, 76.801-059, Brazil

    Marcela Alvares Oliveira

  22. Laboratory of Bromatology, Department of Nutrition, Federal University of Paraíba, Campus I, Cidade Universitária, João Pessoa, PB, 58051-900, Brazil

    Maria Elieidy Gomes de Oliveira

  23. IFungiLab, Subárea de Biologia, Departamento de Ciências da Natureza E Matemática, Instituto Federal de Educação, Ciência E Tecnologia de São Paulo (IFSP), Campus São Paulo (SPO), Rua Pedro Vicente 625, São Paulo, SP, 01109-010, Brazil

    Mariana de Paula Drewinski & Nelson Menolli Jr

  24. Obesity and Comorbidities Research Center, State University of Campinas, Cidade Universitária, Rua Carl Von Linaeus, S/N, Campinas, SP, 13083-864, Brazil

    Marina Maintinguer Norde

  25. Department of Ecology, Universidade Federal Do Rio Grande Do Norte, Natal, Brazil

    Priscila F. M. Lopes

  26. Research Institute of the University of Bucharest, University of Bucharest, Bucharest, Romania

    Priscila F. M. Lopes

  27. Laboratory of Biocultural Ecology, Conservation and Evolution (LECEB), Campus of Engineering and Agricultural Sciences (CECA), BR-104, Km 85, S/N, Rio Largo, AL, 57100-000, Brazil

    Rafael Ricardo Vasconcelos da Silva

  28. Departamento de Biologia, Universidade Estadual da Paraíba (UEPB), João Pessoa, PB, 58071-160, Brazil

    Rômulo Romeu Nóbrega Alves

  29. Laboratory of Biodiversity and Nutrition, Federal University of Rio Grande Do Norte, Avenida Senador Salgado Filho, Natal, Rio Grande Do Norte, 59078-970, Brazil

    Samara Camile Gomes da Silva

  30. Department of Nutrition, Health Sciences Center, Federal University of Paraiba, R. Tabelião Stanislau Eloy, S/N, Castelo Branco, João Pessoa, PB, 58050-585, Brazil

    Sávio Marcelino Gomes

  31. Department of Nutrition, Federal University of Rio Grande Do Norte, Natal, RN, 59078-970, Brazil

    Severina Carla Vieira Cunha Lima

  32. Department of Geography, University College London, North West Wing, London, WC1E 6BT, UK

    Thais Q. Morcatty

  33. Rede de Pesquisa Em Biodiversidade, Conservação e Uso da Fauna da Amazônia (RedeFauna), Manaus, 69067-375, Brazil

    Thais Q. Morcatty

Authors
  1. Michelle Cristine Medeiros Jacob
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  2. Aline Martins de Carvalho
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  3. Ângela Giovana Batista
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  23. Letícia Zenóbia de Oliveira Campos
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  36. Ulysses Paulino Albuquerque
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Contributions

MCMJ led the project with responsibilities in Conceptualization, Data curation, Formal analysis, Funding acquisition, Methodology, Project administration, Validation, Visualization, and Writing (original draft and review & editing). UPA provided Conceptualization, Supervision, and Writing (review & editing). EJMN contributed to Conceptualization, Formal analysis, Methodology, Visualization, and Writing (review & editing). DT, DVBO, FOP, GFM, JKMS, LJGS, MPD, NMJ, PFML, JVMS, SCGS and RRVS contributed to Data Curation, Conceptualization and Writing (review & editing). AMC, SMG, and DMLM contributed to Conceptualization and Writing (review & editing). AGB, AFSJ, AAFC, CMMM, CBBC, EBG, HREB, IWLB, JSA, JS, JAT, LZOC, MAO, MEGO, MMN, RRNA, SCVCL, TQM contributed to Validation and Writing (review & editing). All authors have reviewed and approved the final manuscript and agree to be accountable for all aspects of the work.

Corresponding author

Correspondence to Michelle Cristine Medeiros Jacob.

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The authors declare no competing interests.

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Jacob, M.C.M., de Carvalho, A.M., Batista, Â.G. et al. Prioritizing neglected food species in nutritional studies using expert-knowledge and explainable AI. Sci Rep (2026). https://doi.org/10.1038/s41598-026-39484-6

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  • Received: 25 May 2025

  • Accepted: 05 February 2026

  • Published: 02 March 2026

  • DOI: https://doi.org/10.1038/s41598-026-39484-6

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Keywords

  • Food biodiversity
  • Neglected species
  • Food security
  • Food systems
  • Artificial intelligence
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