Table 2 Structural variant genes involved in Parkinson’s disease in Tribolium castaneum strains with homologous human genes.
T. castaneum | Large-InDel | CNV | Homologous protein ID (human protein) | Humane Gene Symbol | E-value | % Identity | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
Protein ID | Gene ID | Gene name | Products (protein) | L-strain | S-strain | L-strain | S-strain | ||||
XP_008199609.1 | 656,552 | LOC656552 | cAMP-dependent protein kinase catalytic subunit | ✓ | NP_002721.1 | PRKACA | 0 | 84 | |||
XP_015833937.1 | 655,266 | LOC655266 | Calcium/calmodulin-dependent protein kinase type II alpha chain isoform X1 | ✓ | NP_742126.1 | CAMK2D | 0 | 80 | |||
XP_015833945.1 | 655,266 | LOC655266 | Calcium/calmodulin-dependent protein kinase type II delta chain isoform X9 | ✓ | NP_001308520.1 | CAMK2D | 0 | 71 | |||
XP_015833947.1 | 655,266 | LOC655266 | Calcium/calmodulin-dependent protein kinase type II alpha chain isoform X10 | ✓ | NP_001308520.1 | CAMK2D | 0 | 72 | |||
XP_015833948.1 | 655,266 | LOC655266 | Calcium/calmodulin-dependent protein kinase type II alpha chain isoform X11 | ✓ | NP_742126.1 | CAMK2D | 0 | 76 | |||
XP_015833949.1 | 655,266 | LOC655266 | Calcium/calmodulin-dependent protein kinase type II alpha chain isoform X12 | ✓ | NP_742126.1 | CAMK2D | 0 | 77 | |||
XP_015833950.1 | 655,266 | LOC655266 | Calcium/calmodulin-dependent protein kinase type II alpha chain isoform X13 | ✓ | NP_742125.1 | CAMK2D | 0 | 79 | |||
XP_015833951.1 | 655,266 | LOC655266 | Calcium/calmodulin-dependent protein kinase type II alpha chain isoform X14 | ✓ | NP_742126.1 | CAMK2D | 0 | 80 | |||
XP_015833952.1 | 655,266 | LOC655266 | Calcium/calmodulin-dependent protein kinase type II alpha chain isoform X15 | ✓ | NP_742126.1 | CAMK2D | 0 | 82 | |||
XP_015833953.1 | 655,266 | LOC655266 | Calcium/calmodulin-dependent protein kinase type II alpha chain isoform X16 | ✓ | NP_742126.1 | CAMK2D | 0 | 84 | |||
XP_972884.1 | 661,641 | LOC661641 | NADH-ubiquinone oxidoreductase 49 kDa subunit | ✓ | ✓ | ✓ | NP_004541.1 | NDUFS2 | 0 | 79 | |
