Fig. 2 | Scientific Reports

Fig. 2

From: Molecular characterization of bovine viral diarrhea virus and host genetic immune and biochemical responses in diarrheic buffalo calves

Fig. 2

Phylogenetic tree based on the partial 5′ untranslated region (5′UTR) nucleotide sequences of bovine viral diarrhea virus (BVDV) isolates from diarrheic buffalo calves and reference BVDV-1 strains retrieved from GenBank. The tree was constructed using the neighbor-joining method with 1,000 bootstrap replications in MEGA software. Bootstrap values above 80% are shown at the branch nodes. The blue circles indicate the BVDV isolates identified in the present study. The reference strains representing different subgenotypes are labeled with their GenBank accession numbers and isolate names. The studied isolates clustered within the BVDV-1a and BVDV-1b subgenotypes. The scale bar represents 0.01 nucleotide substitutions per site.

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