Skip to main content

Thank you for visiting nature.com. You are using a browser version with limited support for CSS. To obtain the best experience, we recommend you use a more up to date browser (or turn off compatibility mode in Internet Explorer). In the meantime, to ensure continued support, we are displaying the site without styles and JavaScript.

Advertisement

Scientific Reports
  • View all journals
  • Search
  • My Account Login
  • Content Explore content
  • About the journal
  • Publish with us
  • Sign up for alerts
  • RSS feed
  1. nature
  2. scientific reports
  3. articles
  4. article
Gamma-aminobutyric acid transaminase mediates tumor suppression in renal cell carcinoma through the cGAS-STING–interferon-β axis
Download PDF
Download PDF
  • Article
  • Open access
  • Published: 11 March 2026

Gamma-aminobutyric acid transaminase mediates tumor suppression in renal cell carcinoma through the cGAS-STING–interferon-β axis

  • Yi Feng1,2,3 na1,
  • Senming Cao1,2,4 na1,
  • Tianwei Cai1,2,3 na1,
  • Yin Lu1,4,
  • Bin Jiang1,3,
  • Zexuan Lv1,4,
  • Jinlu Tang1,3,
  • Fan Gao1,2,4,
  • Xupeng Zhao1,
  • Chunyu Liu1,2,3,
  • Qi Wang1,2,3,
  • Ji Feng1,2,3,
  • Zheng Wang1,2,3,
  • Qing Ai1,
  • Qiang Cheng1,2,
  • Wenmei Fan1,2 &
  • …
  • Hongzhao Li1 

Scientific Reports , Article number:  (2026) Cite this article

  • 708 Accesses

  • Metrics details

We are providing an unedited version of this manuscript to give early access to its findings. Before final publication, the manuscript will undergo further editing. Please note there may be errors present which affect the content, and all legal disclaimers apply.

Subjects

  • Cancer
  • Cell biology
  • Oncology

Abstract

Clear cell renal cell carcinoma (ccRCC) is resistant to conventional radiotherapy and chemotherapy, creating an urgent need for novel therapeutic strategies. Although GABA transaminase (ABAT) is involved in metabolic reprogramming as reported, its precise function and molecular mechanisms in ccRCC remain unclear. Here, we demonstrate that ABAT overexpression suppresses tumor growth both in vitro and in vivo. Mechanistically, ABAT mediates the cGAS–STING signaling pathway, and interacts with protein arginine methyltransferase 5 (PRMT5), thereby enhances interferon signaling. Besides, ABAT was found to reduce the infiltration of regulatory T cells within the tumor microenvironment. Collectively, these results suggest that ABAT represents a potential therapeutic target in clear cell renal cell carcinoma.

Similar content being viewed by others

GABPA inhibits tumorigenesis in clear cell renal cell carcinoma by regulating ferroptosis through ACSL4

Article Open access 03 November 2024

GABAergic signaling contributes to tumor cell invasion and poor overall survival in colorectal cancer

Article Open access 24 August 2025

Exploring synthetic lethal network for the precision treatment of clear cell renal cell carcinoma

Article Open access 02 August 2022

Data availability

The datasets generated and analysed during the current study are available in the NCBI Sequence Read Archive (SRR36638439, SRR36638436, SRR36638441, SRR36638438, SRR36638440, SRR36638437).

References

  1. Huang, J. et al. A global trend analysis of kidney cancer incidence and mortality and their associations with smoking, alcohol consumption, and metabolic syndrome. Eur. Urol. Focus 8, 200. https://doi.org/10.1016/j.euf.2020.12.020 (2022).

    Google Scholar 

  2. Lindgren, D., Sjölund, J. & Axelson, H. Tracing renal cell carcinomas back to the nephron. Trends Cancer 4, 472. https://doi.org/10.1016/j.trecan.2018.05.003 (2018).

    Google Scholar 

  3. Jonasch, E., Gao, J. & Rathmell, W. K. Renal cell carcinoma. BMJ 349, g4797. https://doi.org/10.1136/bmj.g4797 (2014).

    Google Scholar 

  4. Chen, F. et al. Multilevel genomics-based taxonomy of renal cell carcinoma. Cell Rep. 14, 2476. https://doi.org/10.1016/j.celrep.2016.02.024 (2016).

    Google Scholar 

  5. Hsieh, J. J. et al. Renal cell carcinoma. Nat. Rev. Dis. Primers 3, 17009. https://doi.org/10.1038/nrdp.2017.9 (2017).

    Google Scholar 

  6. He, Y. et al. Perioperative circulating tumor DNA in colorectal liver metastases: Concordance with metastatic tissue and predictive value for tumor burden and prognosis. Cancer Manag Res 12, 1621. https://doi.org/10.2147/cmar.S240869 (2020).

    Google Scholar 

  7. Siegel, R. L., Miller, K. D. & Jemal, A. Cancer statistics, 2015. CA Cancer J. Clin. 65, 5. https://doi.org/10.3322/caac.21254 (2015).

    Google Scholar 

  8. Zhang, B. et al. B cell-derived GABA elicits IL-10(+) macrophages to limit anti-tumour immunity. Nature 599, 471. https://doi.org/10.1038/s41586-021-04082-1 (2021).

    Google Scholar 

  9. Tagore, M. et al. GABA regulates electrical activity and tumor initiation in melanoma. Cancer Discov. 13, 2270. https://doi.org/10.1158/2159-8290.Cd-23-0389 (2023).

    Google Scholar 

  10. Xie, M. et al. GABA regulates metabolic reprogramming to mediate the development of brain metastasis in non-small cell lung cancer. J. Exp. Clin. Cancer Res. 44, 61. https://doi.org/10.1186/s13046-025-03315-9 (2025).

    Google Scholar 

  11. Huang, D. et al. Cancer-cell-derived GABA promotes β-catenin-mediated tumour growth and immunosuppression. Nat. Cell Biol. 24, 230. https://doi.org/10.1038/s41556-021-00820-9 (2022).

    Google Scholar 

  12. Zhang, Q. et al. Insights and progress on the biosynthesis, metabolism, and physiological functions of gamma-aminobutyric acid (GABA): A review. PeerJ 12, e18712. https://doi.org/10.7717/peerj.18712 (2024).

    Google Scholar 

  13. Lu, J. et al. ABAT and ALDH6A1, regulated by transcription factor HNF4A, suppress tumorigenic capability in clear cell renal cell carcinoma. J. Transl. Med. 18, 101. https://doi.org/10.1186/s12967-020-02268-1 (2020).

    Google Scholar 

  14. Zhao, B. et al. Structural basis for concerted recruitment and activation of IRF-3 by innate immune adaptor proteins. Proc. Natl. Acad. Sci. U. S. A. 113, E3403. https://doi.org/10.1073/pnas.1603269113 (2016).

    Google Scholar 

  15. Zhuang, Q. et al. RNA methyltransferase FTSJ3 regulates the Type I Interferon Pathway to promote hepatocellular carcinoma immune evasion. Cancer Res. 84, 405. https://doi.org/10.1158/0008-5472.Can-23-2049 (2024).

    Google Scholar 

  16. Haag, S. M. et al. Targeting STING with covalent small-molecule inhibitors. Nature 559, 269. https://doi.org/10.1038/s41586-018-0287-8 (2018).

    Google Scholar 

  17. Rawling, D. C. et al. Small-molecule antagonists of the RIG-I innate immune receptor. ACS Chem. Biol. 15, 311. https://doi.org/10.1021/acschembio.9b00810 (2020).

    Google Scholar 

  18. Engstrom, L. D. et al. MRTX1719 is an MTA-cooperative PRMT5 inhibitor that exhibits synthetic lethality in preclinical models and patients with MTAP-deleted cancer. Cancer Discov. 13, 2412. https://doi.org/10.1158/2159-8290.Cd-23-0669 (2023).

    Google Scholar 

  19. Kalev, P. et al. MAT2A inhibition blocks the growth of MTAP-deleted cancer cells by reducing PRMT5-dependent mRNA splicing and inducing DNA damage. Cancer Cell 39, 209. https://doi.org/10.1016/j.ccell.2020.12.010 (2021).

    Google Scholar 

  20. Lacroix, M. et al. The histone-binding protein COPR5 is required for nuclear functions of the protein arginine methyltransferase PRMT5. EMBO Rep. 9, 452. https://doi.org/10.1038/embor.2008.45 (2008).

    Google Scholar 

  21. Andreu-Pérez, P. et al. Protein arginine methyltransferase 5 regulates ERK1/2 signal transduction amplitude and cell fate through CRAF. Sci. Signal. 4, ra58. https://doi.org/10.1126/scisignal.2001936 (2011).

    Google Scholar 

  22. Guderian, G. et al. RioK1, a new interactor of protein arginine methyltransferase 5 (PRMT5), competes with pICln for binding and modulates PRMT5 complex composition and substrate specificity. J. Biol. Chem. 286, 1976. https://doi.org/10.1074/jbc.M110.148486 (2011).

    Google Scholar 

  23. El-Hattab, A. W., Craigen, W. J. & Scaglia, F. Mitochondrial DNA maintenance defects. Biochim. Biophys. Acta Mol. Basis Dis. 1863, 1539. https://doi.org/10.1016/j.bbadis.2017.02.017 (2017).

    Google Scholar 

  24. Liu, H. et al. TFAM is an autophagy receptor that limits inflammation by binding to cytoplasmic mitochondrial DNA. Nat. Cell Biol. 26, 878. https://doi.org/10.1038/s41556-024-01419-6 (2024).

    Google Scholar 

  25. Lyu, Q. et al. A small proportion of X-linked genes contribute to X chromosome upregulation in early embryos via BRD4-mediated transcriptional activation. Curr. Biol. 32, 4397. https://doi.org/10.1016/j.cub.2022.08.059 (2022).

    Google Scholar 

  26. George, D. J., Lee, C. H. & Heng, D. New approaches to first-line treatment of advanced renal cell carcinoma. Ther. Adv. Med. Oncol. 13, 17588359211034708. https://doi.org/10.1177/17588359211034708 (2021).

    Google Scholar 

  27. Wang, Z. et al. PRMT5 reduces immunotherapy efficacy in triple-negative breast cancer by methylating KEAP1 and inhibiting ferroptosis. J. Immunother. Cancer. https://doi.org/10.1136/jitc-2023-006890 (2023).

    Google Scholar 

  28. Liu, A. et al. PRMT5 methylating SMAD4 activates TGF-β signaling and promotes colorectal cancer metastasis. Oncogene 42, 1572. https://doi.org/10.1038/s41388-023-02674-x (2023).

    Google Scholar 

  29. Jiang, Y. et al. PRMT5 disruption drives antitumor immunity in cervical cancer by reprogramming T cell-mediated response and regulating PD-L1 expression. Theranostics 11, 9162. https://doi.org/10.7150/thno.59605 (2021).

    Google Scholar 

  30. Yan, W. et al. PRMT5-mediated FUBP1 methylation accelerates prostate cancer progression. J. Clin. Invest. https://doi.org/10.1172/jci175023 (2024).

    Google Scholar 

  31. Frau, M., Feo, F. & Pascale, R. M. Pleiotropic effects of methionine adenosyltransferases deregulation as determinants of liver cancer progression and prognosis. J. Hepatol. 59, 830. https://doi.org/10.1016/j.jhep.2013.04.031 (2013).

    Google Scholar 

  32. Belmontes, B. et al. AMG 193, a clinical stage MTA-cooperative PRMT5 inhibitor, drives antitumor activity preclinically and in patients with MTAP-deleted cancers. Cancer Discov. 15, 139. https://doi.org/10.1158/2159-8290.Cd-24-0887 (2025).

    Google Scholar 

  33. Drizyte-Miller, K. et al. Combination of the MTA-cooperative PRMT5 inhibitor BMS-986504 and KRAS inhibitors is an effective treatment strategy for MTAP-deleted KRAS-mutant pancreatic cancer. Cancer Res. 85, 3540. https://doi.org/10.1158/0008-5472.Can-25-1507 (2025).

    Google Scholar 

  34. Rodon, J. et al. First-in-human study of AMG 193, an MTA-cooperative PRMT5 inhibitor, in patients with MTAP-deleted solid tumors: Results from phase I dose exploration. Ann. Oncol. 35, 1138. https://doi.org/10.1016/j.annonc.2024.08.2339 (2024).

    Google Scholar 

  35. Zhang, C. & Zhuang, S. The role of protein arginine methyltransferases in kidney diseases. Clin. Sci. 134, 2037. https://doi.org/10.1042/cs20200680 (2020).

    Google Scholar 

  36. Che, P. et al. Integrin αvβ3 engagement regulates glucose metabolism and migration through focal adhesion kinase (FAK) and protein arginine methyltransferase 5 (PRMT5) in glioblastoma cells. Cancers https://doi.org/10.3390/cancers13051111 (2021).

    Google Scholar 

  37. Huang, L. et al. Inhibition of protein arginine methyltransferase 5 enhances hepatic mitochondrial biogenesis. J. Biol. Chem. 293, 10884. https://doi.org/10.1074/jbc.RA118.002377 (2018).

    Google Scholar 

  38. Şenbabaoğlu, Y. et al. Tumor immune microenvironment characterization in clear cell renal cell carcinoma identifies prognostic and immunotherapeutically relevant messenger RNA signatures. Genome Biol. 17, 231. https://doi.org/10.1186/s13059-016-1092-z (2016).

    Google Scholar 

  39. Thompson, R. H. et al. PD-1 is expressed by tumor-infiltrating immune cells and is associated with poor outcome for patients with renal cell carcinoma. Clin. Cancer Res. 13, 1757. https://doi.org/10.1158/1078-0432.Ccr-06-2599 (2007).

    Google Scholar 

  40. Rathmell, W. K. et al. Management of metastatic clear cell renal cell carcinoma: ASCO guideline. J. Clin. Oncol. 40, 2957. https://doi.org/10.1200/jco.22.00868 (2022).

    Google Scholar 

  41. Stupichev, D. et al. AI-driven multimodal algorithm predicts immunotherapy and targeted therapy outcomes in clear cell renal cell carcinoma. Cell Rep. Med. 6, 102299. https://doi.org/10.1016/j.xcrm.2025.102299 (2025).

    Google Scholar 

  42. Shah, A. Y. et al. Outcomes of patients with metastatic clear-cell renal cell carcinoma treated with second-line VEGFR-TKI after first-line immune checkpoint inhibitors. Eur. J. Cancer. 114, 67. https://doi.org/10.1016/j.ejca.2019.04.003 (2019).

    Google Scholar 

  43. Li, M. et al. ID1 boosts antiviral immunity by countering PRMT5-mediated STING methylation. Cell Rep. 44, 116547. https://doi.org/10.1016/j.celrep.2025.116547 (2025).

    Google Scholar 

  44. Zhang, H. et al. Epigenetically targeting PRMT5 promotes antitumor immunity by inducing endogenous retroviruses expression and triggering viral mimicry response. Transl. Res. 281, 55. https://doi.org/10.1016/j.trsl.2025.05.007 (2025).

    Google Scholar 

  45. Kim, H. et al. PRMT5 control of cGAS/STING and NLRC5 pathways defines melanoma response to antitumor immunity. Sci. Transl. Med. https://doi.org/10.1126/scitranslmed.aaz5683 (2020).

    Google Scholar 

  46. Zhang, Q. et al. Decoding sunitinib resistance in ccRCC: Metabolic-reprogramming-induced ABAT and GABAergic system shifts. iScience 27, 110415. https://doi.org/10.1016/j.isci.2024.110415 (2024).

    Google Scholar 

Download references

Funding

This study received financial support from the Ministry of Science and Technology of the People’s Republic of China (Hongzhao Li, 2022YFC3602901).

Author information

Author notes
  1. Yi Feng, Senming Cao and Tianwei Cai contributed equally to this work.

Authors and Affiliations

  1. Department of Urology, The Third Medical Center of PLA General Hospital, Beijing, China

    Yi Feng, Senming Cao, Tianwei Cai, Yin Lu, Bin Jiang, Zexuan Lv, Jinlu Tang, Fan Gao, Xupeng Zhao, Chunyu Liu, Qi Wang, Ji Feng, Zheng Wang, Qing Ai, Qiang Cheng, Wenmei Fan & Hongzhao Li

  2. Department of Urology Laboratory, Chinese PLA General Hospital, Beijing, China

    Yi Feng, Senming Cao, Tianwei Cai, Fan Gao, Chunyu Liu, Qi Wang, Ji Feng, Zheng Wang, Qiang Cheng & Wenmei Fan

  3. Medical School of PLA, Beijing, China

    Yi Feng, Tianwei Cai, Bin Jiang, Jinlu Tang, Chunyu Liu, Qi Wang, Ji Feng & Zheng Wang

  4. Medical School of NanKai University, TianJing, China

    Senming Cao, Yin Lu, Zexuan Lv & Fan Gao

Authors
  1. Yi Feng
    View author publications

    Search author on:PubMed Google Scholar

  2. Senming Cao
    View author publications

    Search author on:PubMed Google Scholar

  3. Tianwei Cai
    View author publications

    Search author on:PubMed Google Scholar

  4. Yin Lu
    View author publications

    Search author on:PubMed Google Scholar

  5. Bin Jiang
    View author publications

    Search author on:PubMed Google Scholar

  6. Zexuan Lv
    View author publications

    Search author on:PubMed Google Scholar

  7. Jinlu Tang
    View author publications

    Search author on:PubMed Google Scholar

  8. Fan Gao
    View author publications

    Search author on:PubMed Google Scholar

  9. Xupeng Zhao
    View author publications

    Search author on:PubMed Google Scholar

  10. Chunyu Liu
    View author publications

    Search author on:PubMed Google Scholar

  11. Qi Wang
    View author publications

    Search author on:PubMed Google Scholar

  12. Ji Feng
    View author publications

    Search author on:PubMed Google Scholar

  13. Zheng Wang
    View author publications

    Search author on:PubMed Google Scholar

  14. Qing Ai
    View author publications

    Search author on:PubMed Google Scholar

  15. Qiang Cheng
    View author publications

    Search author on:PubMed Google Scholar

  16. Wenmei Fan
    View author publications

    Search author on:PubMed Google Scholar

  17. Hongzhao Li
    View author publications

    Search author on:PubMed Google Scholar

Contributions

Yi Feng was responsible for conceptualization, data curation, formal analysis, investigation, methodology, and writing of the original draft. Senming Cao was responsible for investigation and methodology. Tianwei Cai was responsible for formal analysis, validation, and methodology. Yin Lu was responsible for formal analysis and investigation. Bin Jiang was responsible for formal analysis and investigation. Zexuan Lv was responsible for formal analysis and investigation. Jinlu Tang was responsible for investigation. Chunyu Liu was responsible for investigation. Qi Wang was responsible for formal analysis. Ji Feng was responsible for investigation. Zheng Wang was responsible for resources. Qi Ai was responsible for resources. Xupeng Zhao was responsible for resources. KL was responsible for conceptualization and data curation. Qiang Cheng was responsible for conceptualization, data curation, and funding acquisition. Wenmei Fan was responsible for conceptualization, resources, supervision, and funding acquisition. Hongzhao Li was responsible for conceptualization, resources, data curation, formal analysis, supervision, funding acquisition, and writing of the original draft.

Corresponding authors

Correspondence to Qiang Cheng, Wenmei Fan or Hongzhao Li.

Ethics declarations

Ethics approval

Renal tissue samples were acquired from the Kidney Biobank of the Department of Urology at the Chinese PLA General Hospital during the period spanning January to December 2019. The study protocol involving human specimens received ethical approval from the Chinese PLA General Hospital Ethics Committee (Approval No. S2013-065-01). Confirming The study is reported in accordance with ARRIVE guidelines. All methods were carried out in accordance with relevant guidelines and regulations.

Competing interests

The authors declare no competing interests.

Additional information

Publisher’s note

Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.

Supplementary Information

Supplementary Information. (download DOCX )

Rights and permissions

Open Access This article is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License, which permits any non-commercial use, sharing, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if you modified the licensed material. You do not have permission under this licence to share adapted material derived from this article or parts of it. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by-nc-nd/4.0/.

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Feng, Y., Cao, S., Cai, T. et al. Gamma-aminobutyric acid transaminase mediates tumor suppression in renal cell carcinoma through the cGAS-STING–interferon-β axis. Sci Rep (2026). https://doi.org/10.1038/s41598-026-42861-w

Download citation

  • Received: 12 December 2025

  • Accepted: 27 February 2026

  • Published: 11 March 2026

  • DOI: https://doi.org/10.1038/s41598-026-42861-w

Share this article

Anyone you share the following link with will be able to read this content:

Sorry, a shareable link is not currently available for this article.

Provided by the Springer Nature SharedIt content-sharing initiative

Keywords

  • Gamma-aminobutyric acid transaminase
  • ccRCC
  • cGAS-STING
  • IFN-β
  • PRMT5
Download PDF

Advertisement

Explore content

  • Research articles
  • News & Comment
  • Collections
  • Subjects
  • Follow us on Facebook
  • Follow us on X
  • Sign up for alerts
  • RSS feed

About the journal

  • About Scientific Reports
  • Contact
  • Journal policies
  • Guide to referees
  • Calls for Papers
  • Editor's Choice
  • Journal highlights
  • Open Access Fees and Funding

Publish with us

  • For authors
  • Language editing services
  • Open access funding
  • Submit manuscript

Search

Advanced search

Quick links

  • Explore articles by subject
  • Find a job
  • Guide to authors
  • Editorial policies

Scientific Reports (Sci Rep)

ISSN 2045-2322 (online)

nature.com footer links

About Nature Portfolio

  • About us
  • Press releases
  • Press office
  • Contact us

Discover content

  • Journals A-Z
  • Articles by subject
  • protocols.io
  • Nature Index

Publishing policies

  • Nature portfolio policies
  • Open access

Author & Researcher services

  • Reprints & permissions
  • Research data
  • Language editing
  • Scientific editing
  • Nature Masterclasses
  • Research Solutions

Libraries & institutions

  • Librarian service & tools
  • Librarian portal
  • Open research
  • Recommend to library

Advertising & partnerships

  • Advertising
  • Partnerships & Services
  • Media kits
  • Branded content

Professional development

  • Nature Awards
  • Nature Careers
  • Nature Conferences

Regional websites

  • Nature Africa
  • Nature China
  • Nature India
  • Nature Japan
  • Nature Middle East
  • Privacy Policy
  • Use of cookies
  • Legal notice
  • Accessibility statement
  • Terms & Conditions
  • Your US state privacy rights
Springer Nature

© 2026 Springer Nature Limited

Nature Briefing: Cancer

Sign up for the Nature Briefing: Cancer newsletter — what matters in cancer research, free to your inbox weekly.

Get what matters in cancer research, free to your inbox weekly. Sign up for Nature Briefing: Cancer