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Resting-state fMRI using hidden Markov models reveals abnormal dynamic brain functional states in asthma
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  • Published: 01 April 2026

Resting-state fMRI using hidden Markov models reveals abnormal dynamic brain functional states in asthma

  • Chunyang Xu1 &
  • Xiangyu Wei2 

Scientific Reports , Article number:  (2026) Cite this article

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We are providing an unedited version of this manuscript to give early access to its findings. Before final publication, the manuscript will undergo further editing. Please note there may be errors present which affect the content, and all legal disclaimers apply.

Subjects

  • Biomarkers
  • Diseases
  • Neurology
  • Neuroscience

Abstract

Asthma involves not only airway inflammation but also aberrant central nervous system regulation. While static functional connectivity studies have revealed brain network abnormalities in asthma patients, the transient temporal dynamics of brain functional states remain largely unexplored. To investigate brain dynamic functional connectivity characteristics in asthma patients using Hidden Markov Models (HMM) and to identify potential neurobiological markers associated with clinical symptoms. Resting-state fMRI data were acquired from an initial pool of participants, with 120 age- and gender-matched individuals (60 asthma patients and 60 healthy controls) included after stringent quality control and head-motion scrubbing. HMM was applied to identify recurring brain states based on the Schaefer-142 parcellation. We compared groups on fractional occupancy (FO), mean dwell time (MDT), and transition probabilities. Exploratory correlation analyses were performed to evaluate the relationship between HMM-derived metrics and clinical scores (ACT and pulmonary function). HMM identified nine distinct functional states. Asthma patients exhibited a significantly increased MDT and FO in State 2 (characterized by somatomotor and dorsal attention network involvement) compared to healthy controls (p < 0.05). Exploratory analysis revealed a nominal positive correlation between the MDT of State 2 and Asthma Control Test (ACT) scores (r = 0.30, p < 0.05, uncorrected), suggesting a potential compensatory role of this state in symptom monitoring. Our findings reveal altered brain state dynamics in asthma, particularly the prolonged occupancy in a sensory-attention-related state. While the brain-clinical associations are exploratory, these dynamic metrics provide novel insights into the central mechanisms of asthma and may serve as preliminary neurobiological markers for symptom control.

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Data availability

The data which support the conclusions of our study is included within the article.

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Funding

This study was supported by grants from : National Natural Science Foundation of China (Grant No. 82205267).

Author information

Authors and Affiliations

  1. Department of Radiology, Longhua Hospital Affiliated to Shanghai University of Traditional Chinese Medicine, Shanghai, China

    Chunyang Xu

  2. Department of Acupuncture and Moxibustion, Shuguang Hospital Affiliated to Shanghai University of Traditional Chinese Medicine, Shanghai, China

    Xiangyu Wei

Authors
  1. Chunyang Xu
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  2. Xiangyu Wei
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Contributions

Chunyang Xu performed MRI data processing. Xiangyu Wei prepared the tables and figures and wrote the manuscript. Xiangyu Wei assisted in participant recruitment. Xiangyu Wei provided financial support for this study. All authors contributed to data interpretation and manuscript revision.

Corresponding author

Correspondence to Xiangyu Wei.

Ethics declarations

Competing interests

The authors declare that they have no conflict of interest.

Ethical approval

This study was approved by the Ethics Committee of Shuguang Hospital, Shanghai University of Traditional Chinese Medicine (Approval No.: 2023-1325-92-01).

Consent to participate

Written informed consent was obtained from all individual participants included in the study.

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Cite this article

Xu, C., Wei, X. Resting-state fMRI using hidden Markov models reveals abnormal dynamic brain functional states in asthma. Sci Rep (2026). https://doi.org/10.1038/s41598-026-44794-w

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  • Received: 06 December 2025

  • Accepted: 13 March 2026

  • Published: 01 April 2026

  • DOI: https://doi.org/10.1038/s41598-026-44794-w

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Keywords

  • Asthma
  • Hidden Markov model
  • Dynamic functional connectivity
  • Brain states
  • Default mode network
  • Resting-state fMRI
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