Abstract
The ability of cells to adapt to stress is fundamental for the maintenance of cellular homeostasis. In this study, we identified a possible adaptation mechanism to pH fluctuations while investigating the role of glutamine metabolism in Drosophila S2 cells. Inhibition of glutaminase (GLS), an enzyme that catalyzes the deamination of glutamine to glutamate, yielding ammonia, has been correlated with an increase in monounsaturated fatty acid (MUFA) content in membrane phospholipids. GLS inhibition–linked lipid remodeling was driven by the selective promotion of MUFA-rich phospholipid biosynthesis and was reversed by the addition of basic compounds such as ammonia, a byproduct of the GLS reaction, or NaOH, but not by glutamate-derived metabolites. Furthermore, lowering the pH of culture medium with HCl or reducing intracellular pH through the inhibition of the Na⁺/H⁺ exchanger resulted in lipid composition changes similar to those observed in GLS-inhibited cells. This suggests that pH changes govern membrane lipid unsaturation and that cellular acidification itself promotes the accumulation of MUFA-rich phospholipids. Notably, cells with higher MUFA levels exhibited higher intracellular pH than those with lower MUFA levels. Taken together, these findings indicate that cells respond to pH fluctuations by adjusting membrane lipid unsaturation to maintain cellular pH homeostasis.
Data availability
All data are contained within the article and supporting information.
References
van Meer, G., Voelker, D. R. & Feigenson, G. W. Membrane lipids: where they are and how they behave. Nat. Rev. Mol. Cell. Biol. 9, 112–124 (2008).
Harayama, T. & Riezman, H. Understanding the diversity of membrane lipid composition. Nat. Rev. Mol. Cell. Bio. 19, 281–296 (2018).
Ernst, R., Ejsing, C. S. & Antonny, B. Homeoviscous adaptation and the regulation of membrane lipids. J. Mol. Biol. 428, 4776–4791 (2016).
Rawicz, W., Olbrich, K. C., McIntosh, T., Needham, D. & Evans, E. Effect of chain length and unsaturation on elasticity of lipid bilayers. Biophys. J. 79, 328–339 (2000).
Pinot, M. et al. Polyunsaturated phospholipids facilitate membrane deformation and fission by endocytic proteins. Science 345, 693–697 (2014).
Budin, I. et al. Viscous control of cellular respiration by membrane lipid composition. Science 362, 1186–1189 (2018).
Murakami, A. et al. Cell-autonomous control of intracellular temperature by unsaturation of phospholipid acyl chains. Cell. Rep. 38, 110487 (2022).
Nagao, K., Suito, T., Murakami, A. & Umeda, M. Lipid-mediated mechanisms of thermal adaptation and thermoregulatory behavior in animals. Adv. Exp. Med. Biol. 1461, 79–95 (2024).
Kadri, L. et al. Polyunsaturated Phospholipids increase cell resilience to mechanical constraints. Cells. 10 (2021).
Pereira, S. L., Leonard, A. E. & Mukerji, P. Recent advances in the study of fatty acid desaturases from animals and lower eukaryotes. Prostaglandins Leukot. Essent. Fat. Acids. 68, 97–106 (2003).
Young, R. S. E. et al. Apocryphal FADS2 activity promotes fatty acid diversification in cancer. Cell. Rep. 34, 108738 (2021).
Kuo, T. H. et al. Deep Lipidomics and Molecular Imaging of Unsaturated Lipid Isomers: A Universal Strategy Initiated by mCPBA Epoxidation. Anal. Chem. 91, 11905–11915 (2019).
Vriens, K. et al. Evidence for an alternative fatty acid desaturation pathway increasing cancer plasticity. Nature 566, 403–406 (2019).
Nagao, K., Murakami, A. & Umeda, M. Structure and Function of Delta9-Fatty Acid Desaturase. Chem. Pharm. Bull. 67, 327–332 (2019).
Matsuo, N. et al. Different mechanisms for selective transport of fatty acids using a single class of lipoprotein in Drosophila. J. Lipid Res. 60, 1199–1211 (2019).
Clark, A. J. & Bloch, K. Absence of Sterol Synthesis in Insects. J. Biol. Chem. 234, 2578–2582 (1959).
Shiomi, A. et al. Extreme deformability of insect cell membranes is governed by phospholipid scrambling. Cell. Rep. 35, 109219 (2021).
Ugur, B., Chen, K. & Bellen, H. J. Drosophila tools and assays for the study of human diseases. Dis. Model. Mech. 9, 235–244 (2016).
Katt, W. P. & Cerione, R. A. Glutaminase regulation in cancer cells: a druggable chain of events. Drug Discov Today. 19, 450–457 (2014).
Yoo, H. C., Yu, Y. C., Sung, Y. & Han, J. M. Glutamine reliance in cell metabolism. Exp. Mol. Med. 52, 1496–1516 (2020).
Wise, D. R. et al. Hypoxia promotes isocitrate dehydrogenase-dependent carboxylation of alpha-ketoglutarate to citrate to support cell growth and viability. Proc. Natl. Acad. Sci. U S A. 108, 19611–19616 (2011).
Metallo, C. M. et al. Reductive glutamine metabolism by IDH1 mediates lipogenesis under hypoxia. Nature 481, 380–384 (2012).
Mullen, A. R. et al. Reductive carboxylation supports growth in tumour cells with defective mitochondria. Nature 481, 385–388 (2012).
Huang, W. et al. A proposed role for glutamine in cancer cell growth through acid resistance. Cell. Res. 23, 724–727 (2013).
Johmura, Y. et al. Senolysis by glutaminolysis inhibition ameliorates various age-associated disorders. Science 371, 265–270 (2021).
Bligh, E. G. & Dyer, W. J. A Rapid Method of Total Lipid Extraction and Purification. Can. J. Biochem. Phys. 37, 911–917 (1959).
Rouser, G., Siakotos, A. N. & Fleischer, S. Quantitative analysis of phospholipids by thin-layer chromatography and phosphorus analysis of spots. Lipids 1, 85–86 (1966).
Nagao, K., Matsuo, M., Hori, Y., Namba, N. & Saito, H. The structural characteristics of cellular phospholipid acyl chains required for ABCA1-mediated HDL formation. J. Biol. Chem. 301, 110457 (2025).
Suito, T. et al. Synthesis of omega-3 long-chain polyunsaturated fatty acid-rich triacylglycerols in an endemic goby, Gymnogobius isaza, from Lake Biwa, Japan. J. Biochem. 164, 127–140 (2018).
Murakami, A., Nagao, K., Juni, N., Hara, Y. & Umeda, M. An N-terminal di-proline motif is essential for fatty acid-dependent degradation of Delta9-desaturase in Drosophila. J. Biol. Chem. 292, 19976–19986 (2017).
Krupp, J. J. et al. Pigment-dispersing factor modulates pheromone production in clock cells that influence mating in drosophila. Neuron 79, 54–68 (2013).
Bleijerveld, O. B., Brouwers, J., Vaandrager, A. B., Helms, J. B. & Houweling, M. The CDP-ethanolamine pathway and phosphatidylserine decarboxylation generate different phosphatidylethanolamine molecular species. J. Biol. Chem. 282, 28362–28372 (2007).
Valentine, W. J. et al. Update and nomenclature proposal for mammalian lysophospholipid acyltransferases, which create membrane phospholipid diversity. J. Biol. Chem. 298, 101470 (2022).
Morimoto, R., Shindou, H., Oda, Y. & Shimizu, T. Phosphorylation of lysophosphatidylcholine acyltransferase 2 at Ser34 enhances platelet-activating factor production in endotoxin-stimulated macrophages. J. Biol. Chem. 285, 29857–29862 (2010).
Shang, S., Liu, J. & Hua, F. Protein acylation: mechanisms, biological functions and therapeutic targets. Signal. Transduct. Target. Ther. 7, 396 (2022).
Luo, J., Yang, H. & Song, B. L. Mechanisms and regulation of cholesterol homeostasis. Nat. Rev. Mol. Cell. Biol. 21, 225–245 (2020).
Shimizu, T. Lipid mediators in health and disease: enzymes and receptors as therapeutic targets for the regulation of immunity and inflammation. Annu. Rev. Pharmacol. Toxicol. 49, 123–150 (2009).
Guerra, I. M. S. et al. Mitochondrial Fatty acid beta-oxidation disorders: from disease to lipidomic studies-a critical review. Int J. Mol. Sci 23 (2022).
Corbo, J. H. & Chung, J. Mechanisms of lipid droplet degradation. Curr. Opin. Cell. Biol. 90, 102402 (2024).
Puertas-Frias, G. et al. Sequestration of the polyunsaturated fatty acids protects the cells with oxidative phosphorylation deficiency from ferroptosis. bioRxiv, 2025.2010.2014.682423 (2025).
Tocanne, J. F. & Teissie, J. Ionization of phospholipids and phospholipid-supported interfacial lateral diffusion of protons in membrane model systems. Biochim. Biophys. Acta. 1031, 111–142 (1990).
MacDonald, R. C., Simon, S. A. & Baer, E. Ionic influences on the phase transition of dipalmitoylphosphatidylserine. Biochemistry 15, 885–891 (1976).
Tiku, P. E., Gracey, A. Y., Macartney, A. I., Beynon, R. J. & Cossins, A. R. Cold-induced expression of delta 9-desaturase in carp by transcriptional and posttranslational mechanisms. Science 271, 815–818 (1996).
Suito, T. et al. Functional expression of Delta12 fatty acid desaturase modulates thermoregulatory behaviour in Drosophila. Sci. Rep. 10, 11798 (2020).
Acknowledgements
The authors acknowledge the Drosophila Genomics Resource Center (NIH Grant 2P40OD010949) for providing GH22838. This work was supported by Grant-in-Aid for Transformative Research Areas (B) [23H03857 (to K.N.)] and Grant-in-Aid for Scientific Research [21K05391 (to K.N.) and 24K01685 (to K.N.)] from Japan Society for the Promotion of Science (JSPS) and Ministry of Education, Culture, Sports, Science and Technology (MEXT) and a grant from Takeda Science Foundation (to K.N.).
Author information
Authors and Affiliations
Contributions
Conceptualization, K.N.; supervision, H.S. and K.N.; investigation, S.M., K.M., and K.N.; writing—original draft preparation, K.N.; writing—review and editing, S.M., K.M., H.S. and K.N.
Corresponding author
Ethics declarations
Competing interests
The authors declare no competing interests.
Additional information
Publisher’s note
Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.
Supplementary Information
Below is the link to the electronic supplementary material.
Rights and permissions
Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.
About this article
Cite this article
Miyamoto, S., Matsumoto, K., Saito, H. et al. Glutaminase inhibition is correlated with an increase in phospholipid unsaturation, a potential cellular adaptation to pH fluctuations. Sci Rep (2026). https://doi.org/10.1038/s41598-026-45555-5
Received:
Accepted:
Published:
DOI: https://doi.org/10.1038/s41598-026-45555-5