Fig. 2: Identified SCNAs in the DSRCT patients.
From: Multi-site desmoplastic small round cell tumors are genetically related and immune-cold
a the SCNA profiles of all the 14 patients (copy number profiles of samples from the same patients were merged by aligning chromosome segments across samples of the same patient and then assigning the mean of copy number changes to the overlapping chromosomal segments and keeping the copy number changes of those sample-specific segments). b Focal copy number alterations identified by GISTIC across the 14 patients. GISTIC q-values (y-axis) for copy amplification (left, red) and deletion (right, blue) peaks were plotted across the chromosomes. The significance levels of focal events are shown as green lines. c Frequency of significant arm-level SCNAs identified by GISTIC. Arm-level SCNAs were considered significant with GISTIC q < 0.05.
