Fig. 3
From: Improved reference genome for the domestic horse increases assembly contiguity and composition
A comparison of equine chromosome 31 between EquCab2 and EquCab3. a Average coverage per 10 kb window across chr31 in EquCab2 and EquCab3, with a large inversion between them highlighted. EquCab3 has fewer coverage drops and more total sequence than EquCab2. b An alignment of chr31 in EquCab2 and EquCab3 shows a large inversion between the two reference genomes. The radiation hybrid (RH) map (c) and Hi-C contact heat maps for EquCab2 (d) and EquCab3 (e) indicate that this discrepancy is the result of a misassembly in EquCab2
