Table 1 miR family members in nut specimens (http://www.mirbase.org)
From: Adipocyte metabolism is improved by TNF receptor-targeting small RNAs identified from dried nuts
miR family | J. californica | J. regia | C. avellana | Conserved miR family |
|---|---|---|---|---|
>miR156c UUGACAGAAGAGAGAGAGCAC | ✓ | ✓ | ✓ | ° |
>miR159a UUUGGAUUGAAGGGAGCUCUA | ✓ | ✓ | ✓ | ° |
>miR162a UCGAUAAACCUCUGCAUCCAG | ✓ | ✓ | ||
>miR166a UCGGACCAGGCUUCAUUCCCC | ✓ | ✓ | ° | |
>miR167-3p AGAUCAUGUGGCAGUUUCACC | ✓ | ✓ | ° | |
>miR167h UGAAGCUGCCAGCAUGAUCUUA | ✓ | ✓ | ° | |
>miR168a-5p UCGCUUGGUGCAGGUCGGGAA | ✓ | ✓ | ||
>miR171a UUGAGCCGCGUCAAUAUCUCC | ✓ | ✓ | ✓ | ° |
>miR171b UUGAGCCGCGUCAAUAUCUCC | ✓ | ✓ | ° | |
>miR172b GCAGCACCAUUAAGAUUCAC | ✓ | ✓ | ° | |
>miR319a UUGGACUGAAGGGAGCUCCCU | ✓ | ✓ | ✓ | ° |
>miR319f AUUGGACUGAAGGGAGCUCC | ✓ | ° | ||
>miR395i CUGAAGUGUUUGGAGGAACUC | ✓ | |||
>miR396b-5p UUCCACAGCUUUCUUGAACUU | ✓ | ° | ||
>miR398b UGUGUUCUCAGGUCGCCCCUG | ✓ | ° | ||
>miR399a CGCCAAAGGAGAGUUGCCCUU | ✓ | ° | ||
>miR403-3p UUAGAUUCACGCACAAACUCG | ✓ | ✓ | ✓ | ° |
>miR408-3p AUGCACUGCCUCUUCCCUGGC | ✓ | |||
>miR482 UCUUUCCUACUCCUCCCAUUCC | ✓ | ✓ | ° | |
>miR482c-5p GGAAUGGGCUGUUUGGGAUG | ✓ | ✓ | ° | |
>miR530 UGCAUUUGCACCUGCACCUCU | ✓ | |||
>miR827-5p UUUGUUGAUGGUCAUCUAUUC | ✓ | |||
>miR2916 UUGGGGGCUCGAAGACGAUCAGAU | ✓ | |||
>miR5653 GAGUUGAGUUGAGUUGAGUUGAGA | ✓ | ✓ | ||
>miR9560-5p AGGCGGUGGAACAAAUAUGAACUU | ✓ | |||
>miR156d UGACAGAAGAGAGUGAGCAC | ✓ | ° | ||
>miR162a-3p UUAGAUUCACGCACAAACUCG | ✓ | |||
>miR166d UCGGACCAGGCUUCAUUCCCC | ✓ | ° | ||
>miR166f UCUCGGACCAGGCUUCAUUCC | ✓ | ° | ||
>miR167f-5p UGAAGCUGCCAGCAUGAUCUU | ✓ | ° | ||
>miR390a-5p AAGCUCAGGAGGGAUAGCGCC | ✓ | |||
>miR394a UUGGCAUUCUGUCCACCUCC | ✓ | |||
>miR395d CUGAAGUGUUUGGGGGAACUC | ✓ | |||
>miR396a-5p UUCCACAGCUUUCUUGAACUG | ✓ | ° | ||
>miR482b UCUUUCCUAUCCCUCCCAUUCC | ✓ | ° | ||
>miR827 UUUGUUGAUGGUCAUCUAAUC | ✓ | |||
>miR829-3p UGCAUCAGUUGGUAUCAGAGCUCA | ✓ | |||
>miR1863b UUUGGCUCUGAUACCAUGUUAAAU | ✓ | |||
>miR7758-5p UUAACGGUCAACUAACGGAUGGAC | ✓ | |||
>miR7782 CCUCUGCUCUGAUACCAUGU | ✓ |
