Table 3 Results of codeml analyses of adaptive evolution across ACE2 gene sequences.
Model | Foreground branch | ω | Proportion of sites | LRT | p | Positively selected sitesa,b |
|---|---|---|---|---|---|---|
Clade C | N/A | ω0 = 0.059, ω1 = 1.000, ω2 = 0.081, ω3 = 1.123, ω4 = 0.236, ω5 = 1.346 | p0 = 0.581, p1 = 0.331, p2-5 = 0.089 | 26.726 | <0.001 | N/A |
Branch-site | Platyrrhines | Background: ω0 = 0.076, ω1 = 1.000, ω2a = 0.076, ω2b = 1.000 Foreground: ω0 = 0.076, ω1 = 1.000, ω2a = 6.218, ω2b = 6.218 | p0 = 0.638, p1 = 0.359, p2a = 0.002, p2b = 0.001 | 0.633 | 0.427 | None |
Catarrhines | Background: ω0 = 0.075, ω1 = 1.000, ω2a = 0.075, ω2b = 1.000 Foreground: ω0 = 0.075, ω1 = 1.000, ω2a = 8.988, ω2b = 8.988 | p0 = 0.631, p1 = 0.356, p2a = 0.009, p2b = 0.005 | 14.546 | 0.0001 | 249M (0.962*), 653A (0.958*), 658V (0.957*) | |
Strepsirrhines | Background: ω0 = 0.072, ω1 = 1.000, ω2a = 0.072, ω2b = 1.000 Foreground: ω0 = 0.072, ω1 = 1.000, ω2a = 1.384, ω2b = 1.384 | p0 = 0.607, p1 = 0.316, p2a = 0.051, p2b = 0.027 | 0.833 | 0.361 | None | |
Bats | Background: ω0 = 0.075, ω1 = 1.000, ω2a = 0.075, ω2b = 1.000 Foreground: ω0 = 0.075, ω1 = 1.000, ω2a = 10.535, ω2b = 10.535 | p0 = 0.626, p1 = 0.338, p2a = 0.024, p2b = 0.013 | 42.649 | <0.001 | 24Q (0.998**), 31E (0.959*), 35E (0.974*), 298V (0.959*), 568L (0.998**), 575G (0.965*) |