Fig. 6: The overlap between identified footprints and FIMO motif sites.
From: ATAC-seq with unique molecular identifiers improves quantification and footprinting
The distribution of three types (CD-only, common, and UD-only) of shuffled intervals overlap (by at least 50%) with FIMO results. The vertical lines indicate the number of footprints identified by pyDNase overlapped with FIMO motif sites. b Bar plot illustrating the ratio of footprints or random intervals overlap with FIMO results in different samples. Error bars depict the 95% confidence interval around mean values at each shuffling-based test (n = 100).
