Table 1 Description of Rhizoctonia spp. genome assembly.

From: Evolutionary and genomic comparisons of hybrid uninucleate and nonhybrid Rhizoctonia fungi

Assembly feature

JN

JNa*

JNb*

LY

XN

Estimated genome size (bp)

97,392,847

/

/

49,083,502

41,800,569

Scaffold count#

36

16

16

19

21

Assembly scaffold size (bp)

96,407,277

49,565,071

46,725,450

48,655,841

41,104,060

Scaffold N50 (bp)

3,505,788

3,231,384

3,505,788

3,192,901

2,303,118

GC%

49.47

49.39

49.58

49.43

47.60

Protein-coding genes

29,028

14,978

14,043

14,549

12,349

Chromosomes

32

16

16

16

16

Genes in chromosomes

29,021

14,978

14,043

14,516

12,305

Repetitive regions (%)

19.9

22.81

16.86

20.88

20.82

Heterozygosity (‰)

0.19

0.22

0.16

0.64

2.56

  1. *Subgenomes of JNa and JNb were divided from JN genome.
  2. #Four scaffolds in JN (total 116,756 bp, predicted 7 genes, 0.12% of assembly size), three scaffolds in LY (253,844 bp, 33 genes, 0.52%), and five scaffolds in XN (400,287 bp, 44 genes, 0.97%) were not assembled into the chromosomes of each genome. Four scaffolds of JN could not be assigned to the JNa and JNb subgenomes.
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