Table 1 Sequencing and assembly statistics.
From: Nutrient-driven genome evolution revealed by comparative genomics of chrysomonad flagellates
Used reads* | Number of | ||||||
|---|---|---|---|---|---|---|---|
Species | Strain | Reads [M] | GC [%] | Coverage | [%] | N50 | Contigs [103] |
C. sphaerica | JBC27 | 70 | 51.3 | 115.7 | 90.6 | 4039 | 35 |
C. fuschlensis | A-R4-D6 | 77.9 | 51.7 | 38.1 | 22.8 | 2506 | 46 |
P. encystans | 1006 | 83.7 | 54.5 | 13.9 | 6.2 | 1019 | 54 |
P. encystans | JBMS11 | 59.7 | 51.4 | 52.2 | 11.9 | 3876 | 29 |
P. lacustris | JBC07⋆ | 80.8⋆ | 53.1 | 116⋆ | 100 | 40,792⋆ | 9.1⋆ |
P. lacustris | JBM10⋆ | 79.6⋆ | 53.1 | 128⋆ | 100 | 52,370⋆ | 9.4⋆ |
P. lacustris | JBNZ41⋆ | 109.0⋆ | 52.9 | 153⋆ | 100 | 24,662⋆ | 13.8⋆ |
S. vulgaris | 199hm | 79.8 | 47.9 | 19.9 | 14.9 | 2675 | 54 |
C. nebulosa | CCAC 4401B | 66.5 | 43.9 | 45 | 50 | 1694 | 79 |
D. divergens | FU18K-A | 64.3 | 45.1 | 60.1 | 70.7 | 1836 | 77 |
D. pediforme | LO226K-S | 81.6 | 51.6 | 111.4 | 79.6 | 2530 | 50 |
Epipyxis sp. | PR26K-G | 67.1 | 34.1 | 88.9 | 52.2 | 11,429 | 17 |
C. danica | 933-7 | 88 | 45.4 | 298.6 | 100 | 97,456 | 14 |
P. malhamensis | DS | 90.4 | 40.4 | 235.6 | 100 | 22,680 | 17 |
M. annulata | WA18K-M | 67.3 | 40.1 | 57.5 | 61.8 | 7384 | 43 |
S. sphagnicola | LO234KE | 112.5 | 46.9 | 88.9 | 61.2 | 2024 | 77 |
