Fig. 5: Intra-cluster distance maps of markers that are expressed in single-cells from each anatomical cluster. | Communications Biology

Fig. 5: Intra-cluster distance maps of markers that are expressed in single-cells from each anatomical cluster.

From: Spatially visualized single-cell pathology of highly multiplexed protein profiles in health and disease

Fig. 5

Intra-cluster average spatial distance network maps are presented for single-cells from multiplexed markers inside anatomical clusters for each multiplexed image pair in healthy and diseased tonsils. The number of markers is 19–22. The color of nodes represents the corresponding cluster of the marker images. Here, only markers within the same cluster determined by anatomical clustering are linked. The red edges between network nodes show short average distances, while blue ones indicate relatively distant marker pairs (scale bar 500 µm).

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