Fig. 3: Avicennia marina genome features. | Communications Biology

Fig. 3: Avicennia marina genome features.

From: A reference-grade genome identifies salt-tolerance genes from the salt-secreting mangrove species Avicennia marina

Fig. 3

a Circos plot of the genome representing 31 chromosomes (a), distribution of the GC content (b), repeat content (c) and gene density (d) calculated in 0.5 Mb window size, expression profile of the genes from leaves, roots, flowers, pneumatophores, and seeds, respectively (e–i), and synteny blocks from intrachromosomal links (j). The bandwidth is proportional to synteny block size. Source data are provided as a Source Data file. Circular representation of chloroplast genome. b Hi-C interaction matrix for A. marina genome assembly with 32 clusters. c Circular representation of chloroplast genome. d Circular representation of the mitochondrial genome.

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