Table 2 Comparison of A. marina genome assembly (AmGA_v1.0) to other high-quality genomes.
Genome features | Oryza sativa (IRGSP1.0) | Arabidopsis thaliana (TAIR10) | Avicennia marina (current study) |
|---|---|---|---|
Estimated genome size (Mb) | 384.2 | 135.0 | 462.7 |
Number of chromosomes (n) | 12 | 5 | 31 |
Total sequence length assembled (Mb) | 382.8 | 134.6 | 456.6 |
Total assembly gap length (Mb) | 9.6 | 0.15 | 1.1 |
Number of scaffolds | 12 | 5 | 32 |
Scaffold N50 (Mb) | 29.9 | 23.46 | 14.6 |
Longest Scaffold (Mb) | 45.0 | 30.42 | 22.9 |
