Fig. 2: Workflow for construction of a Chinese pan-genome (CPG). | Communications Biology

Fig. 2: Workflow for construction of a Chinese pan-genome (CPG).

From: Building a Chinese pan-genome of 486 individuals

Fig. 2

There are four procedures for construction of CPG, (1) generation of four types of contigs, right-end-placed (REP), left-end-placed (LEP), both-end-placed (BEP), and unplaced contigs; (2) identification of the novel representative sequences; (3) modeling of two-component common and individual-specific sequences; (4) further analysis of Chinese Pan-Genome. The first two procedures were in accordance with the APG method.

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