Table 2 Repeat composition in Gojo-0.

From: A chromosome-level genome sequence of Chrysanthemum seticuspe, a model species for hexaploid cultivated chrysanthemum

 

Number of elements

Length occupied

% of sequence

Total length (LG1-9)

-

2,988,175,699

100

Based masked

-

2,425,091,008

81.2

Retroelements

1,812,817

1,746,847,923

58.5

  LINEs:

44,166

26,497,323

0.9

  LTR elements

1,768,651

1,720,350,600

57.6

DNA transposons

63,503

44,440,749

1.5

Rolling-circles

10,409

6,960,574

0.2

Unclassified

1,168,814

608,286,289

20.4

Total interspersed repeats

-

2,399,574,961

80.3

Simple repeats

303,610

16,883,708

0.6

Low complexity

34,095

1671,765

0.1

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