Table 5 Breast cancer (BrCa) and prostate cancer (PrCa) differentially methylated CpGs annotated to the same genes.

From: Integrative multi-omic analysis identifies genetically influenced DNA methylation biomarkers for breast and prostate cancers

Gene

BrCa CpG

PrCa CpG

Common meQTL SNPs

LD of r2 > 0.4 between meQTL SNPs of BrCa and PrCa CpGs

BRI3

cg01877450

cg23245481

0

7 BrCa meQTL SNPs with 2 PrCa meQTL SNPs

LRATD2, PCAT1

cg16015285

cg03374695

2

4 BrCa meQTL SNPs with 17 PrCa meQTL SNPs

LOC102724265, LINC01488

cg08885142

cg18498241

2

16 BrCa meQTL SNPs with 16 PrCa meQTL SNPs

SREBF1

cg08129017

cg08129017

NA

NA

Back to article page